Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL022722.2-201ENST00000402519 180 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC098592.1-201ENST00000419352 333 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 RSL24D1P6-201ENST00000426934 401 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AL050321.1-201ENST00000432363 400 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AL445567.1-201ENST00000439121 144 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AL034418.1-201ENST00000448675 860 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 RPL23AP2-201ENST00000471227 466 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 RPS3AP43-201ENST00000479743 781 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 RPL7P24-201ENST00000493052 752 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC026726.1-201ENST00000512859 601 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 RNU6-759P-201ENST00000516740 103 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 IGHV3-32-201ENST00000519182 355 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 MTCO1P49-201ENST00000523429 802 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AL356057.1-201ENST00000533798 831 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 PARP1P2-201ENST00000556806 195 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 OR4K7P-201ENST00000580232 945 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC083899.3-201ENST00000603413 594 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AL358072.1-201ENST00000604156 575 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC080013.6-201ENST00000606185 215 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AL591424.2-201ENST00000617023 128 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 MIR6810-201ENST00000622701 70 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC073348.1-201ENST00000623002 331 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 MIR492-201ENST00000638676 116 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 MAPK10-373ENST00000641983 6772 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 AL049737.1-201ENST00000413920 1403 ntBASIC4.12□□□□□ -1.75
PCDH9Q9HC56 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDH9Q9HC56 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 RNA5SP130-201ENST00000364431 114 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 RNU6-1200P-201ENST00000384162 107 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 RAB28P1-201ENST00000411517 641 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 HSPE1P12-201ENST00000412576 301 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 TPT1P2-201ENST00000413105 503 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AL365203.2-201ENST00000423444 196 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AC005345.1-201ENST00000431868 217 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AC010881.1-201ENST00000433830 235 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AL356276.2-201ENST00000435919 558 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 YWHAZP7-201ENST00000436906 631 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 MTND4P32-201ENST00000437189 1237 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AL591503.2-201ENST00000442314 1005 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 KATNBL1P3-201ENST00000443475 909 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 NF1P3-201ENST00000457709 450 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 RPS7P7-201ENST00000463499 571 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 RN7SKP31-201ENST00000516354 278 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 RNU6-232P-201ENST00000517144 64 ntBASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.11□□□□□ -1.75
PCDH9Q9HC56 AC125611.1-201ENST00000549563 229 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms