Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC127537.2-201ENST00000439258 465 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 AL353898.1-201ENST00000444055 238 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 Z75741.1-201ENST00000446793 314 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 BUD31P2-201ENST00000449374 300 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 DNAJC19P8-201ENST00000452887 259 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 ST13P14-201ENST00000474095 734 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 AC011825.1-201ENST00000484967 388 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 KCTD9P5-201ENST00000504141 1170 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 ACTR6P1-201ENST00000514311 1104 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 AC105429.2-201ENST00000610567 517 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 AC116563.2-201ENST00000624751 535 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 AC024341.1-201ENST00000526444 1552 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 HMGB1P13-201ENST00000406019 642 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AC007899.1-201ENST00000412776 775 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 RPL32P35-201ENST00000415214 394 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 MTND4P11-201ENST00000417020 1058 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 RPS24P8-201ENST00000431490 402 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 HMGB3P6-201ENST00000444896 598 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AC096576.1-201ENST00000489014 359 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AC034105.3-201ENST00000565294 442 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AC006270.2-201ENST00000578523 652 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AL606834.2-201ENST00000602954 668 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AP003117.2-201ENST00000606010 545 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AL391834.1-201ENST00000609609 560 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AC105227.2-201ENST00000615075 605 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AL359757.2-201ENST00000624309 274 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 SNORA50A-202ENST00000629536 136 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 AC119744.1-201ENST00000454746 1715 ntBASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UPF3BQ9BZI7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 ZNF807-201ENST00000328088 1707 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 RNA5SP374-201ENST00000362939 125 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 SNORA80A-201ENST00000363922 136 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 RPS12P18-201ENST00000442381 270 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 HMGB3P30-201ENST00000457863 606 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 AC097462.2-201ENST00000504623 481 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 CCNHP1-201ENST00000513311 678 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 AC245166.1-201ENST00000521012 253 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 OR4U1P-201ENST00000554958 912 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 AL121594.4-201ENST00000556211 1196 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 CKS1BP3-201ENST00000600888 237 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 PRELID3BP8-201ENST00000604148 295 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 AC107294.1-201ENST00000609524 467 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 MIR6715A-201ENST00000615929 79 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 AL590410.1-201ENST00000617925 333 ntBASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.74□□□□□ -1.81
UPF3BQ9BZI7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 AC008065.1-201ENST00000428525 348 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 ELOCP6-201ENST00000429066 328 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 AC091862.1-201ENST00000438016 1100 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 AC108734.1-201ENST00000439549 399 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 TPMTP4-201ENST00000450749 678 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 ELOCP12-201ENST00000458706 328 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 RPL5P13-201ENST00000462840 709 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 AC078817.1-201ENST00000492623 435 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 AC093278.1-201ENST00000494700 600 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 AC117525.1-201ENST00000515228 503 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 RNU2-58P-201ENST00000516403 183 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 RPL12P22-201ENST00000519073 490 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 AC010653.1-201ENST00000571108 881 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 MIR5004-201ENST00000579078 107 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 AC015849.2-201ENST00000605738 409 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 MIR7106-201ENST00000612419 65 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms