Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC007738.1-201ENST00000413892 348 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AL391219.1-201ENST00000422570 483 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC007283.2-201ENST00000424739 197 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC006335.2-201ENST00000437993 330 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 RPS4XP4-201ENST00000443195 763 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 OR2AO1P-201ENST00000476497 403 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 RPL21P103-201ENST00000479921 488 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC022133.1-201ENST00000490961 571 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 RPL15P21-201ENST00000495592 567 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 RN7SL591P-201ENST00000496150 292 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 NIFKP7-201ENST00000503365 834 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 NDUFA5P12-201ENST00000503796 343 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC093824.1-201ENST00000508796 343 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC022360.1-201ENST00000521058 340 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 HMGB1P33-201ENST00000563485 527 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC093591.2-201ENST00000565254 3843 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 MIR3167-201ENST00000579623 85 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC011451.2-201ENST00000604303 598 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC115621.1-201ENST00000604653 858 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 MIR6839-201ENST00000620425 113 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AP001642.1-201ENST00000624727 2117 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 CASC19-264ENST00000641912 1184 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AL731566.1-201ENST00000620490 1937 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 AC022893.2-201ENST00000564832 3296 ntBASIC5.34□□□□□ -1.55
TRIM55Q9BYV6 FAM91A3P-201ENST00000456826 2544 ntBASIC5.34□□□□□ -1.56
TRIM55Q9BYV6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
TRIM55Q9BYV6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM55Q9BYV6 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.34□□□□□ -1.56
TRIM55Q9BYV6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 NMD3P1-201ENST00000439704 1488 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 RNA5SP234-201ENST00000363916 119 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 RNA5SP131-201ENST00000365452 119 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 SNORA20.2-201ENST00000383922 131 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 MIR19A-201ENST00000384878 82 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 RNU2-47P-201ENST00000410649 186 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AC092447.6-201ENST00000414578 210 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 RPS15AP12-201ENST00000419498 388 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AL133173.1-201ENST00000423458 397 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 MTCO2P19-201ENST00000427513 598 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 RAC1P7-201ENST00000445367 377 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AL450996.1-201ENST00000445574 1202 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AC092989.1-201ENST00000481235 277 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 RPS4XP1-201ENST00000482189 787 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 RN7SL30P-201ENST00000488416 306 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AC116353.2-201ENST00000505332 712 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AC105914.1-201ENST00000511798 226 ntBASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM55Q9BYV6 OR5AQ1P-201ENST00000527596 927 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms