Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COL25A1Q9BXS0 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AL512662.1-201ENST00000624850 2251 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 ZNF101P1-201ENST00000435701 1720 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COL25A1Q9BXS0 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL25A1Q9BXS0 Y_RNA.19-201ENST00000362462 99 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 Y_RNA.122-201ENST00000363331 96 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 SNORA62.2-201ENST00000364672 152 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 SNORA43.1-201ENST00000364863 140 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 SNORD50.2-201ENST00000365465 70 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL25A1Q9BXS0 MIR134-201ENST00000385258 73 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 GLULP6-201ENST00000399502 913 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 MIR450B-201ENST00000401182 78 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 SNORA11.1-201ENST00000408133 129 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 RNA5SP36-201ENST00000410197 133 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC096632.1-201ENST00000427395 310 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 snoU13.20-201ENST00000459180 104 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC026410.2-201ENST00000460281 156 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC108860.1-201ENST00000484521 383 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 RPL23AP72-201ENST00000492447 435 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC116562.3-201ENST00000506136 177 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 RNU1-54P-201ENST00000517181 120 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC068587.5-201ENST00000528506 175 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC025884.1-201ENST00000556034 378 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 NPM1P42-201ENST00000560329 862 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 MIR3160-1-201ENST00000577972 85 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 MIR4270-201ENST00000581799 70 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 MIR5096-201ENST00000583713 70 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC010424.2-201ENST00000607594 443 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 uc_338.12-201ENST00000616344 181 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC024587.1-201ENST00000505925 2157 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL25A1Q9BXS0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
COL25A1Q9BXS0 AL596244.1-201ENST00000567068 3779 ntBASIC6□□□□□ -1.45
COL25A1Q9BXS0 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC087516.1-201ENST00000561236 2428 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 SNORA70.4-201ENST00000365509 134 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 Y_RNA.551-201ENST00000384661 102 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 SNORA57.1-201ENST00000391227 145 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AP000580.1-201ENST00000404439 358 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 RNU2-51P-201ENST00000410708 197 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AL139156.1-201ENST00000412785 841 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC011933.1-201ENST00000413334 321 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 HIGD1AP11-201ENST00000438361 280 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AL450023.1-201ENST00000450868 751 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 RPL21P71-201ENST00000465598 459 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC093852.1-201ENST00000503587 266 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 RNU4-71P-201ENST00000516258 113 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 SNORA40.14-201ENST00000516543 86 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 MRPS21P7-201ENST00000566937 238 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 MIR4675-201ENST00000577898 77 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 MIR4429-201ENST00000580105 73 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms