Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PSMA2P3-201ENST00000429685 675 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 UBE2V1P1-201ENST00000430836 445 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 AL050321.1-201ENST00000432363 400 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 Z77249.1-201ENST00000444622 1175 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 FTH1P25-201ENST00000447665 469 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 RBMY2UP-201ENST00000453474 324 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 AL035407.2-201ENST00000454090 378 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 TVP23BP2-201ENST00000455082 615 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 CENPBD1P1-201ENST00000464061 469 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 AC104027.1-201ENST00000521887 300 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 AC037471.2-201ENST00000564941 598 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 XIST_intron.1-201ENST00000619444 68 ntBASIC3.21□□□□□ -1.9
COL21A1Q96P44 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
COL21A1Q96P44 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL21A1Q96P44 AP001148.1-201ENST00000624124 2359 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC104446.1-201ENST00000613728 1321 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL21A1Q96P44 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL21A1Q96P44 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL21A1Q96P44 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL21A1Q96P44 SNORA63.1-201ENST00000362493 131 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 RNU6-543P-201ENST00000362576 108 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 RNU6-1293P-201ENST00000384077 107 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 BTBD10P2-201ENST00000404779 676 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 MIR1250-201ENST00000408098 113 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 ATP5JP1-201ENST00000431631 322 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 RPL23AP33-201ENST00000442301 452 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 BX276092.4-201ENST00000452056 248 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC008280.2-201ENST00000455473 307 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 RPL7P49-201ENST00000471402 708 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 TMED11P-201ENST00000479478 690 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC114967.1-201ENST00000504890 259 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC104108.1-201ENST00000509930 412 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 TMEM248P1-201ENST00000510579 951 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC093755.1-201ENST00000512950 1023 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 RN7SKP277-201ENST00000516895 283 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 MTND2P26-201ENST00000528255 1029 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 MIR3922-201ENST00000585192 84 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC006557.5-201ENST00000603126 811 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 MIR8058-201ENST00000615737 89 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 RNU6-156P-201ENST00000621869 107 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 AC138649.5-201ENST00000637456 137 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 AL392088.2-201ENST00000637607 285 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL21A1Q96P44 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL21A1Q96P44 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL21A1Q96P44 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 MTND5P28-201ENST00000438005 1594 ntBASIC3.2□□□□□ -1.9
COL21A1Q96P44 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL21A1Q96P44 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.2□□□□□ -1.9
COL21A1Q96P44 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL21A1Q96P44 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL21A1Q96P44 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL21A1Q96P44 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL21A1Q96P44 RNA5SP27-201ENST00000363839 119 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 UBE2V1P15-201ENST00000407776 448 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 Z99755.1-201ENST00000414048 380 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 YME1L1P1-201ENST00000429435 297 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 RPS26P56-201ENST00000444468 240 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC097262.1-201ENST00000452559 548 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 snoU13.7-201ENST00000459220 104 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 AP002884.2-201ENST00000471647 395 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.19□□□□□ -1.9
COL21A1Q96P44 SETP12-201ENST00000514068 805 ntBASIC3.19□□□□□ -1.9
COL21A1Q96P44 SNORA76.2-201ENST00000517095 137 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms