Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 AP001004.1-201ENST00000582468 324 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 MIR5096-201ENST00000583713 70 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 AC027807.2-201ENST00000616099 408 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 MKKS-204ENST00000639674 192 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
DDX11Q96FC9 AC107027.3-201ENST00000565095 3473 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 ZNF37BP-203ENST00000452306 1352 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 CBX3P1-201ENST00000325243 554 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 RNU6-582P-201ENST00000362989 107 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 AL080315.1-201ENST00000406055 466 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC009237.5-201ENST00000414271 501 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 AL389915.1-201ENST00000422463 466 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 RPL7P57-201ENST00000423238 740 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 RPS24P8-201ENST00000431490 402 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 BTF3P10-201ENST00000433415 495 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 USP9YP8-201ENST00000441913 500 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 FDX1P2-201ENST00000450769 375 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 FTH1P2-201ENST00000466086 412 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 MTCYBP18-201ENST00000501056 747 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC091868.1-201ENST00000508746 304 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC048346.1-201ENST00000510247 144 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 MIR5699-201ENST00000578903 90 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 RN7SL690P-201ENST00000582087 240 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC123786.2-201ENST00000603459 275 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AP004247.3-201ENST00000608682 624 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC128687.2-201ENST00000609657 566 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC055764.2-201ENST00000610089 670 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 MIR7973-1-201ENST00000614683 76 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 MIR6758-201ENST00000620653 63 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AL596275.2-204ENST00000641628 552 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 AL596275.2-206ENST00000641957 626 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DDX11Q96FC9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.55□□□□□ -1.52
DDX11Q96FC9 MTND4P12-201ENST00000498999 1377 ntBASIC5.55□□□□□ -1.52
DDX11Q96FC9 MAPK10-349ENST00000641767 3661 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
DDX11Q96FC9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DDX11Q96FC9 AL359922.3-201ENST00000624779 1670 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
DDX11Q96FC9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DDX11Q96FC9 SMG1P6-201ENST00000532337 2930 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 OR4K15-201ENST00000305051 1216 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC126755.2-208ENST00000327792 462 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC138969.1-213ENST00000331436 462 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 RPL32P3-201ENST00000359025 275 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 Y_RNA.453-201ENST00000384223 109 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 RNU6-178P-201ENST00000384631 104 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 CCNG1P1-201ENST00000406783 885 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 HMGB3P23-201ENST00000414981 585 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 RPL21P110-201ENST00000433345 446 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 AL450263.2-201ENST00000439400 589 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms