Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 FRG1DP-201ENST00000635586 771 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 AC104446.1-201ENST00000613728 1321 ntBASIC3.36□□□□□ -1.87
ECHDC3Q96DC8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 MIR607-201ENST00000385241 96 ntBASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 HMGN1P24-201ENST00000412282 298 ntBASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 PNRC2P1-201ENST00000423940 420 ntBASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 RPF2P1-201ENST00000424137 906 ntBASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 MTND4LP7-201ENST00000431728 294 ntBASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AL590399.6-201ENST00000446396 307 ntBASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 snoU13.22-201ENST00000459428 104 ntBASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AC083923.1-201ENST00000523708 376 ntBASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 TGIF1P1-201ENST00000558095 802 ntBASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AL031985.2-201ENST00000600955 480 ntBASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 AC007179.3-201ENST00000604976 235 ntBASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.35□□□□□ -1.87
ECHDC3Q96DC8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 SNORA70.4-201ENST00000365509 134 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 BTBD10P2-201ENST00000404779 676 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 RNA5SP120-201ENST00000410900 112 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 EI24P1-201ENST00000416584 867 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AIMP1P1-201ENST00000418670 937 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC073310.1-201ENST00000423226 1033 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC005189.1-201ENST00000431286 310 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 FABP5P3-201ENST00000437960 408 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AL513321.1-201ENST00000441175 761 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AL662791.1-201ENST00000441992 928 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 Z77249.1-201ENST00000444622 1175 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 RPS4XP13-201ENST00000483219 789 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 RPL31P13-201ENST00000484151 370 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 RPL7P38-201ENST00000488396 739 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC021678.1-201ENST00000505195 936 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 APOOP4-201ENST00000513530 597 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 MIR2276-201ENST00000516886 89 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC093331.1-201ENST00000521474 169 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC027104.1-201ENST00000563702 681 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC090616.5-202ENST00000582111 297 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 CKS1BP3-201ENST00000600888 237 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC040174.2-201ENST00000602701 465 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC125494.3-201ENST00000602759 455 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC012468.1-201ENST00000604888 430 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC073657.2-201ENST00000605661 303 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 MIR1264-201ENST00000616374 69 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 FRG1HP-204ENST00000617940 757 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 SNORD39.4-201ENST00000620099 78 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 ZNF542P-204ENST00000482727 1305 ntBASIC3.34□□□□□ -1.87
ECHDC3Q96DC8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ECHDC3Q96DC8 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.34□□□□□ -1.88
ECHDC3Q96DC8 MTCO1P24-201ENST00000515438 1558 ntBASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms