Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNA5SP28-201ENST00000363841 119 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 RNA5SP151-201ENST00000365632 117 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 Y_RNA.554-201ENST00000384672 102 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.26□□□□□ -1.57
ERCC4Q92889 AL645733.1-201ENST00000402250 217 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
ERCC4Q92889 Y_RNA.598-201ENST00000410480 95 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 USP9YP13-201ENST00000417797 480 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.26□□□□□ -1.57
ERCC4Q92889 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC4Q92889 RBMY2QP-201ENST00000429799 1147 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC4Q92889 AC109583.1-201ENST00000432156 268 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ERCC4Q92889 VN1R54P-201ENST00000435210 1049 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 PGBD4P3-201ENST00000440731 581 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 RPL7P36-201ENST00000444633 681 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC4Q92889 RPL39P6-201ENST00000448289 150 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 MEMO1P3-201ENST00000459811 302 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.26□□□□□ -1.57
ERCC4Q92889 RN7SL826P-201ENST00000479724 288 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC4Q92889 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ERCC4Q92889 KCTD9P2-201ENST00000512203 1013 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.26□□□□□ -1.57
ERCC4Q92889 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.26□□□□□ -1.57
ERCC4Q92889 OR5M2P-201ENST00000529003 936 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 AP004247.1-201ENST00000531556 1289 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.26□□□□□ -1.57
ERCC4Q92889 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC4Q92889 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.26□□□□□ -1.57
ERCC4Q92889 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC4Q92889 RPS3AP4-201ENST00000555161 764 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 ATP5J2P6-201ENST00000565203 266 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC4Q92889 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC4Q92889 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ERCC4Q92889 AC119501.1-201ENST00000603646 475 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 AL357078.3-201ENST00000607528 618 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 AP001521.2-201ENST00000608772 546 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 AL159169.3-201ENST00000608871 561 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.26□□□□□ -1.57
ERCC4Q92889 ASNSP1-201ENST00000518311 1939 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ERCC4Q92889 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ERCC4Q92889 AL442639.1-201ENST00000625030 1899 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.26□□□□□ -1.57
ERCC4Q92889 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ERCC4Q92889 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
ERCC4Q92889 DCAF13P1-201ENST00000495256 1330 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AL118496.1-201ENST00000440201 1812 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.25□□□□□ -1.57
ERCC4Q92889 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ERCC4Q92889 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.25□□□□□ -1.57
ERCC4Q92889 BTF3P7-201ENST00000407097 488 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 RAP1BP3-201ENST00000407180 549 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 HMGB3P23-201ENST00000414981 585 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.25□□□□□ -1.57
ERCC4Q92889 RPL7P30-201ENST00000420888 709 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 GLRXP1-201ENST00000423261 334 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.25□□□□□ -1.57
ERCC4Q92889 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AC104651.2-201ENST00000447549 528 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AURKAPS2-201ENST00000454983 333 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 APOOP2-201ENST00000461561 539 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AC114981.1-201ENST00000503897 678 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 POU5F1P7-201ENST00000508759 541 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 RNA5SP446-201ENST00000515955 82 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 SOD1P3-201ENST00000518682 454 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.25□□□□□ -1.57
ERCC4Q92889 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 OR5M7P-201ENST00000526140 972 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AC124947.2-202ENST00000552735 133 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.25□□□□□ -1.57
ERCC4Q92889 SNORA59B-202ENST00000578183 701 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 MIR4637-201ENST00000582405 84 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 SNORD39.3-201ENST00000584451 71 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 PRELID3BP8-201ENST00000604148 295 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AL133338.2-201ENST00000604292 736 ntBASIC5.25□□□□□ -1.57
ERCC4Q92889 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.25□□□□□ -1.57
ERCC4Q92889 AC097468.3-201ENST00000607956 456 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms