Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RPL7P15-201ENST00000461190 712 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 MTND3P7-201ENST00000474435 343 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 RPS29P19-201ENST00000479709 171 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 RPS3AP43-201ENST00000479743 781 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 GAPDHP36-201ENST00000480688 918 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 VPS26AP1-201ENST00000483197 979 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 WBP1LP4-201ENST00000505043 344 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC048346.1-201ENST00000510247 144 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC010587.2-201ENST00000511727 448 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 RNU1-45P-201ENST00000517191 141 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC008562.1-201ENST00000521763 330 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 COX6B1P6-201ENST00000522347 255 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC135001.1-201ENST00000544546 283 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC125611.1-201ENST00000549563 229 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC022069.1-201ENST00000582910 658 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AL606490.9-201ENST00000603331 271 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC010680.3-201ENST00000604215 520 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AL354984.3-201ENST00000604803 325 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC064801.1-201ENST00000612025 407 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC121761.2-201ENST00000617300 689 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC103858.2-201ENST00000621471 543 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC079248.2-201ENST00000623779 326 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC139792.2-201ENST00000624218 587 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC116563.2-201ENST00000624751 535 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 Z99496.1-201ENST00000469424 1477 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 OR11H4-201ENST00000315409 1082 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 SNORA60-201ENST00000362396 134 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 PTMAP2-201ENST00000397627 327 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC098592.1-201ENST00000419352 333 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 BX119904.4-201ENST00000424402 301 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC009965.2-201ENST00000425328 970 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 AL451062.2-201ENST00000427515 271 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 AL390023.1-201ENST00000428836 262 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 RPL23AP89-201ENST00000439324 255 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 KATNBL1P3-201ENST00000443475 909 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 MTCYBP3-201ENST00000445588 1137 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 AL606662.1-201ENST00000445763 553 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 VN1R34P-201ENST00000447387 883 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC073387.1-201ENST00000453261 709 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 RPF2P2-201ENST00000504693 896 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC079395.1-201ENST00000510981 262 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 RN7SKP31-201ENST00000516354 278 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 RNU6-232P-201ENST00000517144 64 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC006064.5-201ENST00000541782 248 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 MIR4429-201ENST00000580105 73 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 AP003973.1-201ENST00000604639 691 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC243654.2-201ENST00000612843 443 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 AC004825.2-201ENST00000616634 455 ntBASIC3.87□□□□□ -1.79
TM9SF4Q92544 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.87□□□□□ -1.79
TM9SF4Q92544 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF4Q92544 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms