Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ZNF807-201ENST00000328088 1707 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SNED1Q8TER0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 Y_RNA.318-201ENST00000365131 97 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 RNU6-298P-201ENST00000390888 96 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 PTP4A1P7-201ENST00000423476 514 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 NANOGP5-201ENST00000424456 877 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 RPP40P1-201ENST00000426762 456 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 YWHAEP5-201ENST00000431545 765 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 MTND2P21-201ENST00000436242 1042 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC107083.1-201ENST00000439643 279 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 MTCYBP12-201ENST00000440559 1134 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 AL357520.1-201ENST00000441557 453 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 Z73417.1-201ENST00000447373 778 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC112492.1-201ENST00000449607 712 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC008427.1-201ENST00000503102 655 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 RNU6-491P-201ENST00000516099 110 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 AP003033.1-201ENST00000527244 415 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 AP000926.4-201ENST00000527351 454 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 MTCYBP23-201ENST00000558717 1102 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC009097.3-201ENST00000563557 1018 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC010620.1-201ENST00000601088 1102 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC073657.2-201ENST00000605661 303 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 MIR1264-201ENST00000616374 69 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC078880.5-201ENST00000617845 421 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 BMS1P21-201ENST00000634565 365 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 AC119674.1-212ENST00000641155 993 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNED1Q8TER0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNED1Q8TER0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.18□□□□□ -1.74
SNED1Q8TER0 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
SNED1Q8TER0 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNED1Q8TER0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNED1Q8TER0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 DDX43P2-201ENST00000604753 1354 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC114546.3-201ENST00000623582 1734 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNED1Q8TER0 MIR16-2-201ENST00000362117 81 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 RNU6-283P-201ENST00000364788 107 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 SNORD116-8-201ENST00000384365 95 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNED1Q8TER0 GSTA12P-201ENST00000402398 508 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AL121834.1-202ENST00000404494 277 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 HSPE1P8-201ENST00000406997 288 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC016907.1-201ENST00000419483 435 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC241520.1-201ENST00000422654 1099 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC093698.1-201ENST00000423843 571 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 AL096829.2-201ENST00000446582 742 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 MTND1P29-201ENST00000448112 647 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC023598.1-201ENST00000472521 361 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC109925.1-201ENST00000478069 331 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 RPL7P38-201ENST00000488396 739 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 OR9N1P-202ENST00000494289 481 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC021678.1-201ENST00000505195 936 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 PCNAP1-201ENST00000505363 709 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC010486.3-201ENST00000511602 785 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 PDCD5P1-201ENST00000543528 309 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC023825.1-201ENST00000566704 1030 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 AL451007.1-201ENST00000595491 289 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AL358072.1-201ENST00000604156 575 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 RNU4-5P-201ENST00000607255 135 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.17□□□□□ -1.74
SNED1Q8TER0 AC138932.5-201ENST00000617759 563 ntBASIC4.17□□□□□ -1.74
SNED1Q8TER0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNED1Q8TER0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNED1Q8TER0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNED1Q8TER0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNED1Q8TER0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SNED1Q8TER0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNED1Q8TER0 MIR421-201ENST00000365696 85 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNED1Q8TER0 TAF9BP1-201ENST00000396646 746 ntBASIC4.16□□□□□ -1.74
SNED1Q8TER0 RNA5SP498-201ENST00000411342 120 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms