Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 RPS7P15-201ENST00000415804 584 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 RPS6P14-201ENST00000425165 719 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 HMGB1P12-201ENST00000438594 598 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 CFTRP1-201ENST00000456646 183 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AL133477.1-201ENST00000457472 514 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 SNORA59A-201ENST00000459326 152 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 RPS26P15-201ENST00000488067 348 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AC048346.1-201ENST00000510247 144 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AC009101.1-201ENST00000568135 242 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AL355812.1-201ENST00000603215 216 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 VN1R74P-201ENST00000613259 503 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AC103858.2-201ENST00000621471 543 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 BX649567.1-201ENST00000642071 1134 ntBASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HDDC3Q8N4P3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 RNU6-115P-201ENST00000364310 107 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 RNU6-468P-201ENST00000384003 109 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 RPL31P1-201ENST00000398116 372 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AL023807.1-201ENST00000407932 359 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC093698.1-201ENST00000423843 571 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AL035410.1-201ENST00000427409 427 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AP000907.1-201ENST00000428428 510 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AL512637.2-201ENST00000431287 1256 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 CYCSP32-201ENST00000440548 321 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AL662791.1-201ENST00000441992 928 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 SETD6P1-201ENST00000444575 317 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC004022.1-201ENST00000447766 1066 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 RPS17P13-201ENST00000448974 407 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC104073.1-201ENST00000451988 151 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC078785.3-201ENST00000476607 425 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 RPL7P24-201ENST00000493052 752 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 OR5H5P-201ENST00000503164 928 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 RN7SKP289-201ENST00000517244 295 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC006518.2-201ENST00000542513 940 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC091515.1-201ENST00000548110 679 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 MIR5187-201ENST00000583479 76 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 MTATP6P2-201ENST00000603319 678 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC090425.2-201ENST00000608818 501 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AL590282.1-201ENST00000610379 1136 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC005858.4-201ENST00000623191 700 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 AC018555.1-201ENST00000567548 1980 ntBASIC3.82□□□□□ -1.8
HDDC3Q8N4P3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
HDDC3Q8N4P3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.81□□□□□ -1.8
HDDC3Q8N4P3 AC000367.1-201ENST00000452711 1766 ntBASIC3.81□□□□□ -1.8
HDDC3Q8N4P3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HDDC3Q8N4P3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HDDC3Q8N4P3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.81□□□□□ -1.8
HDDC3Q8N4P3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms