Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL096803.3-201ENST00000609032 532 ntBASIC4.12□□□□□ -1.75
VPS8Q8N3P4 AC069234.5-201ENST00000611056 416 ntBASIC4.12□□□□□ -1.75
VPS8Q8N3P4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.12□□□□□ -1.75
VPS8Q8N3P4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS8Q8N3P4 MTND5P27-201ENST00000428871 1720 ntBASIC4.11□□□□□ -1.75
VPS8Q8N3P4 ZNF90P1-201ENST00000480493 1951 ntBASIC4.11□□□□□ -1.75
VPS8Q8N3P4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS8Q8N3P4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS8Q8N3P4 SNORA51.4-201ENST00000364993 124 ntBASIC4.11□□□□□ -1.75
VPS8Q8N3P4 SNORA67.4-201ENST00000384688 142 ntBASIC4.11□□□□□ -1.75
VPS8Q8N3P4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS8Q8N3P4 EXTL2P1-201ENST00000446218 416 ntBASIC4.11□□□□□ -1.75
VPS8Q8N3P4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS8Q8N3P4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS8Q8N3P4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.11□□□□□ -1.75
VPS8Q8N3P4 AC138915.3-201ENST00000562908 1389 ntBASIC4.11□□□□□ -1.75
VPS8Q8N3P4 AC010653.1-201ENST00000571108 881 ntBASIC4.11□□□□□ -1.75
VPS8Q8N3P4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS8Q8N3P4 AL359535.1-201ENST00000612100 1087 ntBASIC4.11□□□□□ -1.75
VPS8Q8N3P4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS8Q8N3P4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS8Q8N3P4 SNORD62.1-201ENST00000362541 86 ntBASIC4.1□□□□□ -1.75
VPS8Q8N3P4 RNU1-100P-201ENST00000365255 165 ntBASIC4.1□□□□□ -1.75
VPS8Q8N3P4 AC073069.1-201ENST00000428657 441 ntBASIC4.1□□□□□ -1.75
VPS8Q8N3P4 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.1□□□□□ -1.75
VPS8Q8N3P4 AL590639.1-201ENST00000456484 337 ntBASIC4.1□□□□□ -1.75
VPS8Q8N3P4 AC126389.1-201ENST00000477436 290 ntBASIC4.1□□□□□ -1.75
VPS8Q8N3P4 RPL23AP44-201ENST00000482216 473 ntBASIC4.1□□□□□ -1.75
VPS8Q8N3P4 AC103975.1-201ENST00000482506 483 ntBASIC4.1□□□□□ -1.75
VPS8Q8N3P4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS8Q8N3P4 AC107294.1-201ENST00000609524 467 ntBASIC4.1□□□□□ -1.75
VPS8Q8N3P4 AC243829.7-201ENST00000633081 225 ntBASIC4.1□□□□□ -1.75
VPS8Q8N3P4 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS8Q8N3P4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VPS8Q8N3P4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS8Q8N3P4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS8Q8N3P4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS8Q8N3P4 RNU6-984P-201ENST00000363236 109 ntBASIC4.09□□□□□ -1.75
VPS8Q8N3P4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS8Q8N3P4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS8Q8N3P4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS8Q8N3P4 OR4C2P-201ENST00000530855 1064 ntBASIC4.09□□□□□ -1.75
VPS8Q8N3P4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS8Q8N3P4 MIR6817-201ENST00000615588 66 ntBASIC4.09□□□□□ -1.75
VPS8Q8N3P4 AL359693.1-201ENST00000614959 2407 ntBASIC4.09□□□□□ -1.76
VPS8Q8N3P4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.09□□□□□ -1.76
VPS8Q8N3P4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
VPS8Q8N3P4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
VPS8Q8N3P4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS8Q8N3P4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VPS8Q8N3P4 ZNF542P-204ENST00000482727 1305 ntBASIC4.08□□□□□ -1.76
VPS8Q8N3P4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VPS8Q8N3P4 AL356057.1-202ENST00000402263 756 ntBASIC4.08□□□□□ -1.76
VPS8Q8N3P4 BMS1P22-201ENST00000414726 313 ntBASIC4.08□□□□□ -1.76
VPS8Q8N3P4 NPM1P13-201ENST00000452663 865 ntBASIC4.08□□□□□ -1.76
VPS8Q8N3P4 AC107015.1-201ENST00000466902 747 ntBASIC4.08□□□□□ -1.76
VPS8Q8N3P4 AC005351.1-201ENST00000511152 786 ntBASIC4.08□□□□□ -1.76
VPS8Q8N3P4 AC096725.1-201ENST00000514266 313 ntBASIC4.08□□□□□ -1.76
VPS8Q8N3P4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS8Q8N3P4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS8Q8N3P4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
VPS8Q8N3P4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS8Q8N3P4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS8Q8N3P4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS8Q8N3P4 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VPS8Q8N3P4 RNU4-82P-201ENST00000362443 140 ntBASIC4.07□□□□□ -1.76
VPS8Q8N3P4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS8Q8N3P4 RNU6-301P-201ENST00000384277 107 ntBASIC4.07□□□□□ -1.76
VPS8Q8N3P4 RNU2-6P-201ENST00000411404 190 ntBASIC4.07□□□□□ -1.76
VPS8Q8N3P4 AC080125.1-201ENST00000414888 684 ntBASIC4.07□□□□□ -1.76
VPS8Q8N3P4 RPLP0P7-201ENST00000416050 667 ntBASIC4.07□□□□□ -1.76
VPS8Q8N3P4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS8Q8N3P4 OR2B8P-201ENST00000432841 938 ntBASIC4.07□□□□□ -1.76
VPS8Q8N3P4 AC009969.1-201ENST00000438726 172 ntBASIC4.07□□□□□ -1.76
VPS8Q8N3P4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS8Q8N3P4 SLC31A1P1-201ENST00000451221 567 ntBASIC4.07□□□□□ -1.76
VPS8Q8N3P4 RNU7-170P-201ENST00000459303 61 ntBASIC4.07□□□□□ -1.76
VPS8Q8N3P4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS8Q8N3P4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
VPS8Q8N3P4 AC006116.7-201ENST00000590141 756 ntBASIC4.07□□□□□ -1.76
VPS8Q8N3P4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS8Q8N3P4 AP000526.1-201ENST00000603308 1388 ntBASIC4.07□□□□□ -1.76
VPS8Q8N3P4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS8Q8N3P4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS8Q8N3P4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS8Q8N3P4 RPL23AP74-201ENST00000437246 471 ntBASIC4.06□□□□□ -1.76
VPS8Q8N3P4 AC011816.1-201ENST00000441346 546 ntBASIC4.06□□□□□ -1.76
VPS8Q8N3P4 ST13P20-201ENST00000447996 1065 ntBASIC4.06□□□□□ -1.76
VPS8Q8N3P4 RPL23AP11-201ENST00000475260 469 ntBASIC4.06□□□□□ -1.76
VPS8Q8N3P4 AC018797.3-201ENST00000513388 1241 ntBASIC4.06□□□□□ -1.76
VPS8Q8N3P4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS8Q8N3P4 AL389895.1-201ENST00000554127 252 ntBASIC4.06□□□□□ -1.76
VPS8Q8N3P4 AGGF1P8-201ENST00000562979 1000 ntBASIC4.06□□□□□ -1.76
VPS8Q8N3P4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS8Q8N3P4 WARS-244ENST00000627608 123 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS8Q8N3P4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
VPS8Q8N3P4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
VPS8Q8N3P4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS8Q8N3P4 MIR365B-201ENST00000362317 111 ntBASIC4.05□□□□□ -1.76
VPS8Q8N3P4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms