Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 PHBP17-201ENST00000528576 541 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 OR5BC1P-201ENST00000529327 739 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AL360157.1-201ENST00000565962 87 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 ELOCP28-201ENST00000590044 317 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC079587.1-201ENST00000603846 277 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC115286.1-201ENST00000604298 434 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC068276.1-201ENST00000605793 379 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AL354760.1-201ENST00000608357 643 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC012360.2-201ENST00000609349 391 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC018755.4-201ENST00000619715 454 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AP005019.3-201ENST00000620418 560 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC103858.2-201ENST00000621471 543 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC019278.1-201ENST00000623516 479 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 OR11H5P-202ENST00000641612 1325 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 RPL21P132-201ENST00000331267 462 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 Y_RNA.3-201ENST00000362331 103 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 RNU6-178P-201ENST00000384631 104 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 RNY3P10-201ENST00000384764 102 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC097374.1-203ENST00000400783 485 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 RPL31P52-201ENST00000407532 367 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 TMSB10P2-201ENST00000416049 131 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 RPS23P10-201ENST00000416185 486 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC092634.6-201ENST00000418558 192 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AL590609.2-201ENST00000421430 368 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC093698.1-201ENST00000423843 571 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 LARP1BP3-201ENST00000437229 869 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC006466.1-201ENST00000438721 289 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 COX6CP12-201ENST00000446748 202 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 ST13P20-201ENST00000447996 1065 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 RN7SL610P-201ENST00000463845 291 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 SRRM1P2-201ENST00000464531 1192 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC108078.3-201ENST00000502633 489 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC109458.1-201ENST00000508858 316 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 PARP4P3-201ENST00000510265 317 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC018797.3-201ENST00000513388 1241 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 SLC2A13P1-201ENST00000531560 322 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AL352979.3-201ENST00000553515 247 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 GTF2IP22-201ENST00000554443 182 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 PSMB7P1-201ENST00000556349 514 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC107982.3-201ENST00000584957 985 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC020914.6-201ENST00000594327 272 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC012603.1-201ENST00000606424 528 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC025594.3-201ENST00000613068 790 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC100827.5-201ENST00000615883 426 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 MIR7703-201ENST00000620784 77 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC079228.1-201ENST00000624774 1049 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC120349.2-201ENST00000625002 298 ntBASIC4.01□□□□□ -1.77
CLIP4Q8N3C7 AC026634.1-201ENST00000634369 198 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms