Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 Y_RNA.529-201ENST00000384586 119 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 MIR589-201ENST00000385238 99 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 MIR1182-201ENST00000408363 97 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC009965.2-201ENST00000425328 970 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AL513185.2-201ENST00000425543 193 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AL353777.1-201ENST00000425552 326 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC004980.3-201ENST00000447046 365 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 FDX1P2-201ENST00000450769 375 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC093270.2-201ENST00000486157 792 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 COX6B1P2-201ENST00000489624 230 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC034222.1-201ENST00000494052 532 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 NDUFA5P12-201ENST00000503796 343 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC010587.1-201ENST00000505809 469 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC004980.4-201ENST00000513375 203 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC068993.1-201ENST00000546724 589 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 MIR3167-201ENST00000579623 85 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC005261.5-201ENST00000596280 355 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC008814.1-201ENST00000603797 406 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC010680.3-201ENST00000604215 520 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AL136363.1-201ENST00000605349 337 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 RNU6-156P-201ENST00000621869 107 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AL606537.1-201ENST00000607258 2011 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AL450345.1-202ENST00000605741 3881 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 SNURFL-201ENST00000309296 343 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 SNORA58B-201ENST00000364259 136 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AC013429.2-201ENST00000418798 781 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AL592293.2-201ENST00000422292 996 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 DDX39BP1-205ENST00000422507 192 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 REREP1Y-201ENST00000422655 198 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 EI24P4-201ENST00000423683 1078 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AC007283.2-201ENST00000424739 197 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 OR51AB1P-201ENST00000429046 620 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 RPL7AP49-201ENST00000429522 581 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AL591438.1-201ENST00000433508 581 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 REREP2Y-201ENST00000439103 200 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 SNRPGP6-201ENST00000451124 220 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AC092647.2-201ENST00000452998 253 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 RAD23BP3-201ENST00000454157 1152 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 snoU13.20-201ENST00000459180 104 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AC097484.1-201ENST00000471148 389 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 RN7SL97P-201ENST00000486780 299 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 RPL36AP51-201ENST00000487216 318 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 MIR4646-201ENST00000580775 63 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AC011626.1-201ENST00000604710 562 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 BX664608.1-201ENST00000610519 487 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 RMST_3.1-201ENST00000611651 109 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AC118658.2-201ENST00000618697 459 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 YWHAEP7-203ENST00000622054 312 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AC093648.1-201ENST00000623546 606 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AC091953.2-201ENST00000623979 160 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 MTND1P37-201ENST00000636562 264 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 AL034549.2-201ENST00000618285 3373 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms