Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 SNRPEP3-201ENST00000338402 276 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 SNORA73.2-201ENST00000364946 201 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 RNU6-657P-201ENST00000383904 107 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 RNU5A-2P-201ENST00000384337 116 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AL024474.1-201ENST00000404655 591 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 MIR1284-201ENST00000408337 120 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC068533.2-201ENST00000411872 306 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 VDAC1P9-201ENST00000412766 841 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 TPT1P2-201ENST00000413105 503 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC107081.1-201ENST00000414975 361 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AL354941.1-201ENST00000438600 464 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 PPIAP3-201ENST00000450588 505 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 DDX39BP2-208ENST00000453923 258 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 RPL7P22-201ENST00000466005 733 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC114981.1-201ENST00000503897 678 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC104090.1-201ENST00000506341 1171 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 PAICSP4-201ENST00000517543 1253 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AL352979.3-201ENST00000553515 247 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 MTND3P12-201ENST00000559068 328 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC002400.1-201ENST00000569310 726 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 OR4G1P-201ENST00000588632 938 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 SLC25A36P1-201ENST00000590111 465 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC012468.1-201ENST00000604888 430 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC243773.3-201ENST00000613270 256 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AL121772.2-201ENST00000614331 297 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AL158196.1-201ENST00000616786 434 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 AC009237.17-201ENST00000618111 748 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 PABPC1P7-201ENST00000413177 1513 ntBASIC4.56□□□□□ -1.68
HERC6Q8IVU3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 OR10J6P-201ENST00000289731 930 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 RNA5SP119-201ENST00000362715 117 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 RNU4-6P-201ENST00000410804 122 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 RAB9AP3-201ENST00000412737 573 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 YWHAZP7-201ENST00000436906 631 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 RPL23AP74-201ENST00000437246 471 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 RPL39P6-201ENST00000448289 150 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 RAB9AP1-201ENST00000449393 573 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC104073.1-201ENST00000451988 151 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 RPL18AP17-201ENST00000455326 198 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AL109741.2-201ENST00000455561 343 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 snoU13.24-201ENST00000458998 104 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 RPL7P15-201ENST00000461190 712 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AF213884.1-201ENST00000488102 463 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 MTND2P38-201ENST00000522536 667 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 MRPS36P5-201ENST00000551909 298 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC120057.2-201ENST00000571520 271 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AP001180.3-201ENST00000582221 145 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 BNIP3P24-201ENST00000593398 557 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC006539.2-201ENST00000601729 572 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC021171.1-201ENST00000603137 706 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AL160290.3-201ENST00000604869 165 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC231657.1-201ENST00000624313 397 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 AC055839.1-201ENST00000634467 498 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HERC6Q8IVU3 ZNF734P-201ENST00000419494 1534 ntBASIC4.55□□□□□ -1.68
HERC6Q8IVU3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 LINC00561-201ENST00000565815 2738 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 RNA5SP307-201ENST00000362863 116 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms