Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC109315.1-201ENST00000584143 1347 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC130650.2-201ENST00000618736 2403 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RNU6-50P-201ENST00000362356 103 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RNU5D-1-201ENST00000363299 116 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RNU6-263P-201ENST00000363811 107 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RNU4-28P-201ENST00000364739 141 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RNU6-821P-201ENST00000390995 107 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AL590084.1-201ENST00000407885 387 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RNU4-78P-201ENST00000410940 126 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RPS7P15-201ENST00000415804 584 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 KRR1P1-201ENST00000419430 803 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 XKRYP1-201ENST00000423438 492 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 COX6B1P7-201ENST00000430845 235 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 XKRYP2-201ENST00000432915 492 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 BTF3P10-201ENST00000433415 495 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 SETP5-201ENST00000437270 562 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 SNORA71B-202ENST00000439232 272 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RPL23AP76-201ENST00000441860 458 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 HMGN2P16-201ENST00000456802 261 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 MTCO3P2-201ENST00000457365 171 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 snoU13.24-201ENST00000458998 104 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RPL7P47-201ENST00000497299 556 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC008837.2-201ENST00000513076 418 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 RN7SKP31-201ENST00000516354 278 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 MTCO2P15-201ENST00000532655 656 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 TRAV15-201ENST00000556680 249 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC138915.2-201ENST00000569776 97 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AL163642.2-201ENST00000604722 1019 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC091946.2-201ENST00000606105 291 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC092954.1-201ENST00000609121 445 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC083809.1-201ENST00000615051 472 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC092650.2-201ENST00000619984 902 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 LARP1BP1-201ENST00000506036 1359 ntBASIC3.88□□□□□ -1.79
NUP54Q7Z3B4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 FAM3C2-201ENST00000312214 681 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 RNA5SP52-201ENST00000362448 134 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 RNA5SP235-201ENST00000365411 114 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 Y_RNA.465-201ENST00000384293 102 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 RNA5SP80-201ENST00000410475 111 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 RNU2-42P-201ENST00000410697 113 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 RAD23BP2-201ENST00000416003 1207 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 HIGD1AP15-201ENST00000416198 280 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 RPL22P18-201ENST00000417197 377 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 SDCBPP2-201ENST00000424643 885 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 USP9YP11-201ENST00000427537 717 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 HMGB3P5-201ENST00000428894 612 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 RPL7P52-201ENST00000449200 742 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 RN7SL385P-201ENST00000468873 276 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC010285.1-201ENST00000470580 392 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC010301.1-201ENST00000473936 355 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms