Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CTR9Q6PD62 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CTR9Q6PD62 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CTR9Q6PD62 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTR9Q6PD62 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTR9Q6PD62 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AL118496.1-201ENST00000440201 1812 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTR9Q6PD62 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTR9Q6PD62 MIR208A-201ENST00000362287 71 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 SNORA63.1-201ENST00000362493 131 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 RNA5SP42-201ENST00000364278 115 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTR9Q6PD62 MIR490-201ENST00000384865 128 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 MIR7-3-201ENST00000384898 110 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 MTND2P9-201ENST00000422293 931 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AL159987.2-201ENST00000432754 307 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 FABP5P3-201ENST00000437960 408 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC092170.1-201ENST00000440211 356 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 RPS26P30-201ENST00000443431 335 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 PRDX3P3-201ENST00000447765 522 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 OR51B8P-201ENST00000449892 769 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 U3.44-201ENST00000458938 192 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 SUMO2P5-201ENST00000506790 245 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 ARL2BPP6-201ENST00000512757 439 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 RN7SKP60-201ENST00000516985 239 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 YWHAZP1-201ENST00000556286 722 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC099489.2-201ENST00000574976 260 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC115085.1-201ENST00000588924 229 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC067852.4-201ENST00000590314 478 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 KLKP1-201ENST00000595979 403 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 AP002802.2-201ENST00000605877 235 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC019176.2-201ENST00000611579 315 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTR9Q6PD62 OTUD4P1-201ENST00000237841 3067 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTR9Q6PD62 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.23□□□□□ -1.73
CTR9Q6PD62 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTR9Q6PD62 AL133383.2-201ENST00000622958 2336 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 AL049781.1-201ENST00000623195 3585 ntBASIC4.23□□□□□ -1.73
CTR9Q6PD62 AC104446.1-201ENST00000613728 1321 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTR9Q6PD62 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTR9Q6PD62 AL353743.4-201ENST00000422653 1547 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.22□□□□□ -1.73
CTR9Q6PD62 AC119744.1-201ENST00000454746 1715 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTR9Q6PD62 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CTR9Q6PD62 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTR9Q6PD62 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTR9Q6PD62 MTATP6P31-201ENST00000406985 692 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 RNU2-65P-201ENST00000410162 185 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 RN7SKP53-201ENST00000411337 315 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 LIPT1P1-201ENST00000415870 1186 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.22□□□□□ -1.73
CTR9Q6PD62 RPL21P110-201ENST00000433345 446 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.22□□□□□ -1.73
CTR9Q6PD62 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.22□□□□□ -1.73
CTR9Q6PD62 TPMTP4-201ENST00000450749 678 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 DNAJC19P8-201ENST00000452887 259 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 AC104982.1-201ENST00000478775 574 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.22□□□□□ -1.73
CTR9Q6PD62 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.22□□□□□ -1.73
CTR9Q6PD62 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.22□□□□□ -1.73
CTR9Q6PD62 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.22□□□□□ -1.73
CTR9Q6PD62 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 RN7SKP83-201ENST00000516512 178 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 RNU6-579P-201ENST00000516879 102 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 AC008489.1-201ENST00000524271 483 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 AL139174.1-201ENST00000531489 886 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.22□□□□□ -1.73
CTR9Q6PD62 CYB5AP5-201ENST00000549779 389 ntBASIC4.22□□□□□ -1.73
CTR9Q6PD62 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms