Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDH1Q08174 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AL138713.1-201ENST00000624026 2130 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDH1Q08174 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PCDH1Q08174 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDH1Q08174 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDH1Q08174 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AL359922.3-201ENST00000624779 1670 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDH1Q08174 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDH1Q08174 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDH1Q08174 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PCDH1Q08174 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDH1Q08174 RNA5SP477-201ENST00000362639 119 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDH1Q08174 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PCDH1Q08174 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PCDH1Q08174 RNU6-907P-201ENST00000390924 102 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 RN7SKP158-201ENST00000410453 326 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 Y_RNA.605-201ENST00000410577 105 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 RPL37P10-201ENST00000412884 288 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AC115283.1-201ENST00000427353 400 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 OR2AS1P-201ENST00000427827 319 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDH1Q08174 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDH1Q08174 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDH1Q08174 MTND1P9-201ENST00000453775 944 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 SNRPFP3-201ENST00000457792 225 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AL049874.2-201ENST00000492636 288 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 RN7SL57P-201ENST00000493687 290 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AC025458.1-201ENST00000506046 166 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 RNU6-1088P-201ENST00000516850 104 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDH1Q08174 RNU6-988P-201ENST00000519081 107 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AP000889.2-201ENST00000532684 490 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AC079905.1-201ENST00000549280 475 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDH1Q08174 MIR4260-201ENST00000583107 67 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDH1Q08174 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDH1Q08174 BNIP3P25-201ENST00000596023 559 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AC005191.1-201ENST00000603950 358 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AL499605.1-201ENST00000604628 403 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDH1Q08174 uc_338.34-201ENST00000617467 174 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDH1Q08174 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDH1Q08174 AC091305.2-201ENST00000624049 1576 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
PCDH1Q08174 LINC01963-201ENST00000562038 3148 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDH1Q08174 MAPK10-338ENST00000641647 3362 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AL359955.1-201ENST00000455242 3275 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 AC244517.1-201ENST00000606030 2086 ntBASIC5.57□□□□□ -1.52
PCDH1Q08174 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDH1Q08174 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
PCDH1Q08174 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 MTND4P14-201ENST00000435799 1354 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDH1Q08174 AC235565.1-201ENST00000456962 1325 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
PCDH1Q08174 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PCDH1Q08174 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 RNU6-511P-201ENST00000363496 107 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 SNORD82-201ENST00000365530 70 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 RPS4XP9-201ENST00000405151 780 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDH1Q08174 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.56□□□□□ -1.52
PCDH1Q08174 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDH1Q08174 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDH1Q08174 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDH1Q08174 AL137792.2-201ENST00000443484 235 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDH1Q08174 CBX1P2-201ENST00000453841 458 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 AC091685.2-201ENST00000454924 864 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 AC025164.1-201ENST00000496249 478 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 AL139099.1-201ENST00000497398 403 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDH1Q08174 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDH1Q08174 GLUD1P3-202ENST00000508551 200 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 RPL39P5-202ENST00000512505 151 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 SMURF2P1-201ENST00000514992 481 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 RNU2-10P-201ENST00000516375 211 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 RNU6-1038P-201ENST00000516516 104 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms