Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PRKDCP78527 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PRKDCP78527 MRPS18BP2-201ENST00000434310 759 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 RPS26P40-201ENST00000435209 294 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 RPS12P2-201ENST00000439728 269 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 RPL23AP31-201ENST00000456160 467 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC1.97□□□□□ -2.09
PRKDCP78527 AL583832.1-201ENST00000603227 784 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.97□□□□□ -2.09
PRKDCP78527 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.97□□□□□ -2.09
PRKDCP78527 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PRKDCP78527 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
PRKDCP78527 SNORA36C-201ENST00000384289 132 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 BTF3P7-201ENST00000407097 488 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.96□□□□□ -2.1
PRKDCP78527 RPL5P16-201ENST00000471467 790 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 HNRNPKP5-201ENST00000515300 253 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.96□□□□□ -2.1
PRKDCP78527 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.96□□□□□ -2.1
PRKDCP78527 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PRKDCP78527 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
PRKDCP78527 AC104454.1-201ENST00000421341 1401 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
PRKDCP78527 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
PRKDCP78527 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.96□□□□□ -2.1
PRKDCP78527 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PRKDCP78527 TAF9P1-201ENST00000445421 515 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 TAF9P2-201ENST00000454958 515 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PRKDCP78527 RN7SKP219-201ENST00000516825 296 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 RNA5SP480-201ENST00000516840 109 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.96□□□□□ -2.1
PRKDCP78527 AC093673.2-201ENST00000609674 331 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 AC019080.5-201ENST00000624891 757 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
PRKDCP78527 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC1.96□□□□□ -2.1
PRKDCP78527 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PRKDCP78527 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.96□□□□□ -2.1
PRKDCP78527 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PRKDCP78527 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC1.96□□□□□ -2.1
PRKDCP78527 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
PRKDCP78527 AC011816.1-201ENST00000441346 546 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PRKDCP78527 PRELID3BP7-201ENST00000503606 469 ntBASIC1.96□□□□□ -2.1
PRKDCP78527 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
PRKDCP78527 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC1.96□□□□□ -2.1
PRKDCP78527 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
PRKDCP78527 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PRKDCP78527 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC1.95□□□□□ -2.1
PRKDCP78527 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
PRKDCP78527 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRKDCP78527 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC1.95□□□□□ -2.1
PRKDCP78527 AL049610.1-201ENST00000423374 372 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 AL359821.1-201ENST00000605519 182 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 AC090897.3-201ENST00000636973 1157 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 AC012020.1-201ENST00000624541 1728 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
PRKDCP78527 BX005019.1-201ENST00000561881 1810 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PRKDCP78527 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PRKDCP78527 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRKDCP78527 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRKDCP78527 AL121882.1-201ENST00000422893 417 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.95□□□□□ -2.1
PRKDCP78527 AC011242.1-201ENST00000433596 1158 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 AC096638.1-201ENST00000444678 216 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 HIGD1AP2-201ENST00000446367 280 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 AC091917.2-201ENST00000505002 744 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC1.95□□□□□ -2.1
PRKDCP78527 OR5AK3P-201ENST00000527486 1297 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.95□□□□□ -2.1
PRKDCP78527 OR1AB1P-201ENST00000585564 761 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 DDX18P3-201ENST00000404856 2007 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PRKDCP78527 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
PRKDCP78527 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
PRKDCP78527 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRKDCP78527 AC010881.1-201ENST00000433830 235 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC1.95□□□□□ -2.1
PRKDCP78527 AC234781.5-201ENST00000508429 271 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 RNA5SP320-201ENST00000516263 124 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.95□□□□□ -2.1
PRKDCP78527 AC015911.5-201ENST00000587076 451 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC1.95□□□□□ -2.1
PRKDCP78527 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRKDCP78527 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.95□□□□□ -2.1
PRKDCP78527 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
PRKDCP78527 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PRKDCP78527 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRKDCP78527 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
PRKDCP78527 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
PRKDCP78527 AC005539.1-201ENST00000443768 1479 ntBASIC1.95□□□□□ -2.1
PRKDCP78527 MIR518E-201ENST00000385252 88 ntBASIC1.94□□□□□ -2.1
PRKDCP78527 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.94□□□□□ -2.1
PRKDCP78527 AC108860.1-201ENST00000484521 383 ntBASIC1.94□□□□□ -2.1
PRKDCP78527 SCGB1D5P-201ENST00000515134 247 ntBASIC1.94□□□□□ -2.1
PRKDCP78527 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC1.94□□□□□ -2.1
PRKDCP78527 VN1R9P-201ENST00000614184 867 ntBASIC1.94□□□□□ -2.1
PRKDCP78527 AL136981.2-201ENST00000617319 734 ntBASIC1.94□□□□□ -2.1
PRKDCP78527 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms