Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC073657.2-201ENST00000605661 303 ntBASIC2.89□□□□□ -1.95
LSM6P62312 AC004832.5-201ENST00000608677 401 ntBASIC2.89□□□□□ -1.95
LSM6P62312 AC239803.2-201ENST00000610161 430 ntBASIC2.89□□□□□ -1.95
LSM6P62312 AC019176.2-201ENST00000611579 315 ntBASIC2.89□□□□□ -1.95
LSM6P62312 AL590240.3-201ENST00000621416 943 ntBASIC2.89□□□□□ -1.95
LSM6P62312 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.89□□□□□ -1.95
LSM6P62312 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LSM6P62312 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LSM6P62312 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.88□□□□□ -1.95
LSM6P62312 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LSM6P62312 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.88□□□□□ -1.95
LSM6P62312 SAGE4P-201ENST00000442271 3381 ntBASIC2.88□□□□□ -1.95
LSM6P62312 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LSM6P62312 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LSM6P62312 RNU1-70P-201ENST00000362618 164 ntBASIC2.88□□□□□ -1.95
LSM6P62312 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.88□□□□□ -1.95
LSM6P62312 RNU6-1293P-201ENST00000384077 107 ntBASIC2.88□□□□□ -1.95
LSM6P62312 RNA5SP229-201ENST00000410809 99 ntBASIC2.88□□□□□ -1.95
LSM6P62312 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM6P62312 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.88□□□□□ -1.95
LSM6P62312 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM6P62312 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM6P62312 B3GNT2P1-201ENST00000434960 952 ntBASIC2.88□□□□□ -1.95
LSM6P62312 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM6P62312 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.88□□□□□ -1.95
LSM6P62312 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM6P62312 PLGLA-201ENST00000465668 449 ntBASIC2.88□□□□□ -1.95
LSM6P62312 AC104687.1-201ENST00000485829 412 ntBASIC2.88□□□□□ -1.95
LSM6P62312 AC108078.3-201ENST00000502633 489 ntBASIC2.88□□□□□ -1.95
LSM6P62312 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM6P62312 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.88□□□□□ -1.95
LSM6P62312 AC022616.2-201ENST00000523185 300 ntBASIC2.88□□□□□ -1.95
LSM6P62312 AP000619.3-201ENST00000535634 1127 ntBASIC2.88□□□□□ -1.95
LSM6P62312 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.88□□□□□ -1.95
LSM6P62312 AC023158.1-201ENST00000561632 1025 ntBASIC2.88□□□□□ -1.95
LSM6P62312 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.88□□□□□ -1.95
LSM6P62312 YWHAQP7-201ENST00000603536 658 ntBASIC2.88□□□□□ -1.95
LSM6P62312 AL109618.2-201ENST00000605527 211 ntBASIC2.88□□□□□ -1.95
LSM6P62312 NF1P10-201ENST00000613227 742 ntBASIC2.88□□□□□ -1.95
LSM6P62312 RNU6-156P-201ENST00000621869 107 ntBASIC2.88□□□□□ -1.95
LSM6P62312 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.88□□□□□ -1.95
LSM6P62312 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LSM6P62312 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.88□□□□□ -1.95
LSM6P62312 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LSM6P62312 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.88□□□□□ -1.95
LSM6P62312 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LSM6P62312 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LSM6P62312 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
LSM6P62312 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.87□□□□□ -1.95
LSM6P62312 RNU1-33P-201ENST00000364249 162 ntBASIC2.87□□□□□ -1.95
LSM6P62312 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LSM6P62312 RN7SKP123-201ENST00000410732 291 ntBASIC2.87□□□□□ -1.95
LSM6P62312 HMGN1P24-201ENST00000412282 298 ntBASIC2.87□□□□□ -1.95
LSM6P62312 HSFY4P-201ENST00000415994 1181 ntBASIC2.87□□□□□ -1.95
LSM6P62312 AC245052.5-201ENST00000416320 649 ntBASIC2.87□□□□□ -1.95
LSM6P62312 MTCO3P4-201ENST00000419236 787 ntBASIC2.87□□□□□ -1.95
LSM6P62312 HSPE1P1-201ENST00000421494 318 ntBASIC2.87□□□□□ -1.95
LSM6P62312 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.87□□□□□ -1.95
LSM6P62312 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.87□□□□□ -1.95
LSM6P62312 AL050321.1-201ENST00000432363 400 ntBASIC2.87□□□□□ -1.95
LSM6P62312 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.87□□□□□ -1.95
LSM6P62312 TRIM60P18-201ENST00000441518 828 ntBASIC2.87□□□□□ -1.95
LSM6P62312 RPL21P133-201ENST00000443666 476 ntBASIC2.87□□□□□ -1.95
LSM6P62312 AC093392.2-201ENST00000450682 337 ntBASIC2.87□□□□□ -1.95
LSM6P62312 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.87□□□□□ -1.95
LSM6P62312 SYPL1P1-201ENST00000473622 768 ntBASIC2.87□□□□□ -1.95
LSM6P62312 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM6P62312 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.87□□□□□ -1.95
LSM6P62312 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM6P62312 RNA5SP217-201ENST00000515959 91 ntBASIC2.87□□□□□ -1.95
LSM6P62312 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM6P62312 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.87□□□□□ -1.95
LSM6P62312 AC007458.1-201ENST00000542812 373 ntBASIC2.87□□□□□ -1.95
LSM6P62312 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.87□□□□□ -1.95
LSM6P62312 HIGD1AP1-201ENST00000550979 275 ntBASIC2.87□□□□□ -1.95
LSM6P62312 MIR4506-201ENST00000584693 77 ntBASIC2.87□□□□□ -1.95
LSM6P62312 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
LSM6P62312 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.87□□□□□ -1.95
LSM6P62312 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.87□□□□□ -1.95
LSM6P62312 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LSM6P62312 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LSM6P62312 AC092435.3-201ENST00000565538 3654 ntBASIC2.87□□□□□ -1.95
LSM6P62312 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.87□□□□□ -1.95
LSM6P62312 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
LSM6P62312 AC008264.2-201ENST00000610193 3731 ntBASIC2.86□□□□□ -1.95
LSM6P62312 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.86□□□□□ -1.95
LSM6P62312 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LSM6P62312 RNA5SP44-201ENST00000410446 133 ntBASIC2.86□□□□□ -1.95
LSM6P62312 RPL32P35-201ENST00000415214 394 ntBASIC2.86□□□□□ -1.95
LSM6P62312 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.86□□□□□ -1.95
LSM6P62312 OR1AA1P-201ENST00000419597 916 ntBASIC2.86□□□□□ -1.95
LSM6P62312 RFESDP1-201ENST00000422350 461 ntBASIC2.86□□□□□ -1.95
LSM6P62312 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.86□□□□□ -1.95
LSM6P62312 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.86□□□□□ -1.95
LSM6P62312 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.86□□□□□ -1.95
LSM6P62312 CDC27P1-201ENST00000445384 715 ntBASIC2.86□□□□□ -1.95
LSM6P62312 AC115115.1-201ENST00000449927 248 ntBASIC2.86□□□□□ -1.95
LSM6P62312 RPL36AP33-201ENST00000450395 310 ntBASIC2.86□□□□□ -1.95
LSM6P62312 Z99714.1-201ENST00000450463 807 ntBASIC2.86□□□□□ -1.95
LSM6P62312 ELOCP23-201ENST00000452014 332 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms