Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL121839.2-201ENST00000565058 6943 ntBASIC5.88□□□□□ -1.47
USP11P51784 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP11P51784 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USP11P51784 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
USP11P51784 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP11P51784 OR5P1P-201ENST00000299512 925 ntBASIC5.88□□□□□ -1.47
USP11P51784 Y_RNA.46-201ENST00000362695 102 ntBASIC5.88□□□□□ -1.47
USP11P51784 U8.4-201ENST00000363626 134 ntBASIC5.88□□□□□ -1.47
USP11P51784 Y_RNA.259-201ENST00000364619 101 ntBASIC5.88□□□□□ -1.47
USP11P51784 RNU6-456P-201ENST00000384493 107 ntBASIC5.88□□□□□ -1.47
USP11P51784 MIR765-201ENST00000390226 114 ntBASIC5.88□□□□□ -1.47
USP11P51784 RNU6-510P-201ENST00000391239 108 ntBASIC5.88□□□□□ -1.47
USP11P51784 RPL5P18-201ENST00000406671 891 ntBASIC5.88□□□□□ -1.47
USP11P51784 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.88□□□□□ -1.47
USP11P51784 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.88□□□□□ -1.47
USP11P51784 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.88□□□□□ -1.47
USP11P51784 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.88□□□□□ -1.47
USP11P51784 Z82205.1-201ENST00000428456 297 ntBASIC5.88□□□□□ -1.47
USP11P51784 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.88□□□□□ -1.47
USP11P51784 AC022022.1-201ENST00000430304 178 ntBASIC5.88□□□□□ -1.47
USP11P51784 SNRPEP7-201ENST00000438350 220 ntBASIC5.88□□□□□ -1.47
USP11P51784 HMGB1P18-201ENST00000438801 619 ntBASIC5.88□□□□□ -1.47
USP11P51784 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.88□□□□□ -1.47
USP11P51784 AC092647.2-201ENST00000452998 253 ntBASIC5.88□□□□□ -1.47
USP11P51784 SBDSP1-204ENST00000453858 737 ntBASIC5.88□□□□□ -1.47
USP11P51784 AC108161.1-201ENST00000461060 402 ntBASIC5.88□□□□□ -1.47
USP11P51784 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.88□□□□□ -1.47
USP11P51784 RPS18P6-201ENST00000476880 458 ntBASIC5.88□□□□□ -1.47
USP11P51784 AC034159.1-201ENST00000513885 583 ntBASIC5.88□□□□□ -1.47
USP11P51784 RNA5SP230-201ENST00000517039 122 ntBASIC5.88□□□□□ -1.47
USP11P51784 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.88□□□□□ -1.47
USP11P51784 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.88□□□□□ -1.47
USP11P51784 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USP11P51784 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.88□□□□□ -1.47
USP11P51784 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.88□□□□□ -1.47
USP11P51784 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.88□□□□□ -1.47
USP11P51784 MIR3167-201ENST00000579623 85 ntBASIC5.88□□□□□ -1.47
USP11P51784 MIR4742-201ENST00000581069 85 ntBASIC5.88□□□□□ -1.47
USP11P51784 MIR4660-201ENST00000583549 74 ntBASIC5.88□□□□□ -1.47
USP11P51784 AC011373.1-201ENST00000607270 237 ntBASIC5.88□□□□□ -1.47
USP11P51784 AC090948.1-201ENST00000607464 549 ntBASIC5.88□□□□□ -1.47
USP11P51784 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
USP11P51784 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
USP11P51784 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USP11P51784 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.88□□□□□ -1.47
USP11P51784 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.88□□□□□ -1.47
USP11P51784 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP11P51784 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
USP11P51784 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP11P51784 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
USP11P51784 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.87□□□□□ -1.47
USP11P51784 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP11P51784 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP11P51784 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
USP11P51784 Y_RNA.387-201ENST00000383918 102 ntBASIC5.87□□□□□ -1.47
USP11P51784 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP11P51784 AL356967.1-201ENST00000406305 431 ntBASIC5.87□□□□□ -1.47
USP11P51784 SPTLC1P2-201ENST00000407089 121 ntBASIC5.87□□□□□ -1.47
USP11P51784 RNU2-62P-201ENST00000410868 191 ntBASIC5.87□□□□□ -1.47
USP11P51784 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.87□□□□□ -1.47
USP11P51784 GTF2IP13-201ENST00000438487 386 ntBASIC5.87□□□□□ -1.47
USP11P51784 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.87□□□□□ -1.47
USP11P51784 RNU7-136P-201ENST00000458819 69 ntBASIC5.87□□□□□ -1.47
USP11P51784 Y_RNA.631-201ENST00000459607 101 ntBASIC5.87□□□□□ -1.47
USP11P51784 BX284632.1-201ENST00000478218 541 ntBASIC5.87□□□□□ -1.47
USP11P51784 AC090096.1-201ENST00000489168 390 ntBASIC5.87□□□□□ -1.47
USP11P51784 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.87□□□□□ -1.47
USP11P51784 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.87□□□□□ -1.47
USP11P51784 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.87□□□□□ -1.47
USP11P51784 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.87□□□□□ -1.47
USP11P51784 AP002373.2-201ENST00000541631 1060 ntBASIC5.87□□□□□ -1.47
USP11P51784 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.87□□□□□ -1.47
USP11P51784 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.87□□□□□ -1.47
USP11P51784 AC006116.3-201ENST00000592968 361 ntBASIC5.87□□□□□ -1.47
USP11P51784 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
USP11P51784 VN1R107P-201ENST00000601784 209 ntBASIC5.87□□□□□ -1.47
USP11P51784 AC104237.2-201ENST00000612456 443 ntBASIC5.87□□□□□ -1.47
USP11P51784 RPSAP73-201ENST00000614820 330 ntBASIC5.87□□□□□ -1.47
USP11P51784 AC009237.17-201ENST00000618111 748 ntBASIC5.87□□□□□ -1.47
USP11P51784 AL356585.4-201ENST00000623078 1229 ntBASIC5.87□□□□□ -1.47
USP11P51784 AC009161.2-201ENST00000624626 138 ntBASIC5.87□□□□□ -1.47
USP11P51784 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.87□□□□□ -1.47
USP11P51784 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.87□□□□□ -1.47
USP11P51784 MAPK10-328ENST00000641553 4009 ntBASIC5.87□□□□□ -1.47
USP11P51784 SOCS5P3-201ENST00000425115 1576 ntBASIC5.87□□□□□ -1.47
USP11P51784 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP11P51784 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
USP11P51784 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP11P51784 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.87□□□□□ -1.47
USP11P51784 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP11P51784 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
USP11P51784 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP11P51784 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.86□□□□□ -1.47
USP11P51784 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP11P51784 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP11P51784 AC007823.1-201ENST00000569932 1566 ntBASIC5.86□□□□□ -1.47
USP11P51784 AC109780.1-201ENST00000451768 1344 ntBASIC5.86□□□□□ -1.47
USP11P51784 RNU5E-1-201ENST00000362477 120 ntBASIC5.86□□□□□ -1.47
USP11P51784 RNU6-1120P-201ENST00000362988 108 ntBASIC5.86□□□□□ -1.47
USP11P51784 RNA5SP223-201ENST00000365174 120 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms