Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF144AP50876 AC005912.1-201ENST00000495392 255 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 AC083829.1-201ENST00000503756 657 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF144AP50876 MTCO3P44-201ENST00000510977 541 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF144AP50876 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF144AP50876 RNA5SP418-201ENST00000515951 117 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 RNU6-685P-201ENST00000517088 95 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF144AP50876 TPRX1P1-201ENST00000557620 319 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF144AP50876 HMGN2P28-201ENST00000606102 262 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 AC068213.1-201ENST00000625124 226 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF144AP50876 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RNF144AP50876 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
RNF144AP50876 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.9□□□□□ -1.47
RNF144AP50876 LINC02019-201ENST00000608605 2060 ntBASIC5.9□□□□□ -1.47
RNF144AP50876 AC007342.5-201ENST00000571340 2142 ntBASIC5.9□□□□□ -1.47
RNF144AP50876 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF144AP50876 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.47
RNF144AP50876 GABPAP-201ENST00000419271 1356 ntBASIC5.9□□□□□ -1.47
RNF144AP50876 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.9□□□□□ -1.47
RNF144AP50876 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RNF144AP50876 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF144AP50876 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RNF144AP50876 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF144AP50876 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF144AP50876 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RNF144AP50876 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.89□□□□□ -1.47
RNF144AP50876 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF144AP50876 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF144AP50876 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF144AP50876 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF144AP50876 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF144AP50876 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
RNF144AP50876 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF144AP50876 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
RNF144AP50876 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RNF144AP50876 Y_RNA.19-201ENST00000362462 99 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 Y_RNA.29-201ENST00000362570 113 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 SNORA64.3-201ENST00000365647 134 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF144AP50876 RNU6-214P-201ENST00000384130 107 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 Y_RNA.551-201ENST00000384661 102 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RNF144AP50876 AC004386.1-201ENST00000393214 761 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AP000580.1-201ENST00000404439 358 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF144AP50876 AC069218.2-201ENST00000411665 344 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 GSTM3P2-201ENST00000412746 530 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 CYCSP52-201ENST00000422857 310 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF144AP50876 RPL12P34-201ENST00000424532 479 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF144AP50876 AC110602.1-201ENST00000437414 318 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.89□□□□□ -1.47
RNF144AP50876 NOTCH2P1-201ENST00000443481 624 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 CYCSP51-201ENST00000443545 318 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 RPS18P1-201ENST00000447840 458 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF144AP50876 RN7SL165P-201ENST00000477476 291 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 UBA52P7-201ENST00000486088 380 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF144AP50876 CEACAMP10-202ENST00000495431 496 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AC093852.1-201ENST00000503587 266 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AC018645.1-201ENST00000505003 109 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AC104057.1-201ENST00000515547 497 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 RNU6-570P-201ENST00000517051 105 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AC007991.1-201ENST00000522680 631 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 WBP1LP3-201ENST00000523033 208 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AL133399.1-201ENST00000527476 298 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.89□□□□□ -1.47
RNF144AP50876 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.89□□□□□ -1.47
RNF144AP50876 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.89□□□□□ -1.47
RNF144AP50876 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF144AP50876 AC084783.1-201ENST00000565846 910 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AC005341.1-201ENST00000571086 708 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 AC012433.1-201ENST00000588916 398 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.89□□□□□ -1.47
RNF144AP50876 AC012368.3-201ENST00000604190 219 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
RNF144AP50876 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF144AP50876 AC211486.4-201ENST00000621495 113 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF144AP50876 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF144AP50876 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF144AP50876 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF144AP50876 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF144AP50876 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF144AP50876 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF144AP50876 AC104966.1-201ENST00000467010 1464 ntBASIC5.89□□□□□ -1.47
RNF144AP50876 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RNF144AP50876 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.88□□□□□ -1.47
RNF144AP50876 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF144AP50876 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF144AP50876 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms