Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.38□□□□□ -1.55
MRE11P49959 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
MRE11P49959 AC093311.1-201ENST00000506586 2021 ntBASIC5.38□□□□□ -1.55
MRE11P49959 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MRE11P49959 TEX21P-201ENST00000447107 1476 ntBASIC5.38□□□□□ -1.55
MRE11P49959 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.38□□□□□ -1.55
MRE11P49959 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MRE11P49959 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MRE11P49959 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MRE11P49959 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
MRE11P49959 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MRE11P49959 SNORA62.2-201ENST00000364672 152 ntBASIC5.37□□□□□ -1.55
MRE11P49959 RNA5SP455-201ENST00000365190 119 ntBASIC5.37□□□□□ -1.55
MRE11P49959 RNA5SP151-201ENST00000365632 117 ntBASIC5.37□□□□□ -1.55
MRE11P49959 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
MRE11P49959 HSPD1P16-201ENST00000402302 394 ntBASIC5.37□□□□□ -1.55
MRE11P49959 RN7SKP114-201ENST00000410327 279 ntBASIC5.37□□□□□ -1.55
MRE11P49959 RNA5SP345-201ENST00000410646 108 ntBASIC5.37□□□□□ -1.55
MRE11P49959 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.37□□□□□ -1.55
MRE11P49959 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.37□□□□□ -1.55
MRE11P49959 AL590609.2-201ENST00000421430 368 ntBASIC5.37□□□□□ -1.55
MRE11P49959 ISCA1P1-201ENST00000426679 387 ntBASIC5.37□□□□□ -1.55
MRE11P49959 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
MRE11P49959 RPS27AP12-201ENST00000429552 465 ntBASIC5.37□□□□□ -1.55
MRE11P49959 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.37□□□□□ -1.55
MRE11P49959 PPIAP17-201ENST00000438507 471 ntBASIC5.37□□□□□ -1.55
MRE11P49959 AC092013.1-201ENST00000438795 332 ntBASIC5.37□□□□□ -1.55
MRE11P49959 DNAJC19P4-201ENST00000440115 345 ntBASIC5.37□□□□□ -1.55
MRE11P49959 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.37□□□□□ -1.55
MRE11P49959 AL671855.1-201ENST00000446875 1203 ntBASIC5.37□□□□□ -1.55
MRE11P49959 EEF1E1P1-201ENST00000446998 430 ntBASIC5.37□□□□□ -1.55
MRE11P49959 EIF4A1P11-201ENST00000451239 222 ntBASIC5.37□□□□□ -1.55
MRE11P49959 OR9M1P-201ENST00000459641 921 ntBASIC5.37□□□□□ -1.55
MRE11P49959 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
MRE11P49959 AC008802.1-201ENST00000519121 791 ntBASIC5.37□□□□□ -1.55
MRE11P49959 IGHV3-32-201ENST00000519182 355 ntBASIC5.37□□□□□ -1.55
MRE11P49959 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.37□□□□□ -1.55
MRE11P49959 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.37□□□□□ -1.55
MRE11P49959 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.37□□□□□ -1.55
MRE11P49959 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.37□□□□□ -1.55
MRE11P49959 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
MRE11P49959 MIR3667-201ENST00000581025 74 ntBASIC5.37□□□□□ -1.55
MRE11P49959 KPNA2P3-201ENST00000584190 848 ntBASIC5.37□□□□□ -1.55
MRE11P49959 AC005771.1-201ENST00000585581 349 ntBASIC5.37□□□□□ -1.55
MRE11P49959 AC011477.5-201ENST00000586571 259 ntBASIC5.37□□□□□ -1.55
MRE11P49959 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.37□□□□□ -1.55
MRE11P49959 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.37□□□□□ -1.55
MRE11P49959 AC068790.5-201ENST00000602741 355 ntBASIC5.37□□□□□ -1.55
MRE11P49959 AL390816.3-201ENST00000604527 1066 ntBASIC5.37□□□□□ -1.55
MRE11P49959 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.37□□□□□ -1.55
MRE11P49959 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
MRE11P49959 AL359314.1-201ENST00000616913 261 ntBASIC5.37□□□□□ -1.55
MRE11P49959 AC006133.1-201ENST00000617106 264 ntBASIC5.37□□□□□ -1.55
MRE11P49959 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
MRE11P49959 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.37□□□□□ -1.55
MRE11P49959 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.37□□□□□ -1.55
MRE11P49959 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.37□□□□□ -1.55
MRE11P49959 MAPK10-253ENST00000641010 4072 ntBASIC5.37□□□□□ -1.55
MRE11P49959 CYP1D1P-201ENST00000416662 1433 ntBASIC5.37□□□□□ -1.55
MRE11P49959 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MRE11P49959 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MRE11P49959 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MRE11P49959 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MRE11P49959 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
MRE11P49959 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
MRE11P49959 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MRE11P49959 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.36□□□□□ -1.55
MRE11P49959 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MRE11P49959 AC016716.1-201ENST00000265882 708 ntBASIC5.36□□□□□ -1.55
MRE11P49959 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MRE11P49959 RPL21P132-201ENST00000331267 462 ntBASIC5.36□□□□□ -1.55
MRE11P49959 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MRE11P49959 IGKV7-3-201ENST00000357453 298 ntBASIC5.36□□□□□ -1.55
MRE11P49959 RNU6-694P-201ENST00000364071 147 ntBASIC5.36□□□□□ -1.55
MRE11P49959 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 BTF3P7-201ENST00000407097 488 ntBASIC5.36□□□□□ -1.55
MRE11P49959 RPL23AP47-201ENST00000408017 460 ntBASIC5.36□□□□□ -1.55
MRE11P49959 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MRE11P49959 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.36□□□□□ -1.55
MRE11P49959 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 AC099336.2-201ENST00000422457 254 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AC091390.3-201ENST00000426478 338 ntBASIC5.36□□□□□ -1.55
MRE11P49959 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.36□□□□□ -1.55
MRE11P49959 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.36□□□□□ -1.55
MRE11P49959 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.36□□□□□ -1.55
MRE11P49959 NANOGNBP1-201ENST00000448444 480 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AC003071.1-201ENST00000451219 789 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.36□□□□□ -1.55
MRE11P49959 AC099560.2-201ENST00000457554 255 ntBASIC5.36□□□□□ -1.55
MRE11P49959 ARPC3P2-201ENST00000457786 533 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AC010618.1-201ENST00000469924 477 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AC097484.1-201ENST00000471148 389 ntBASIC5.36□□□□□ -1.55
MRE11P49959 RPL23AP2-201ENST00000471227 466 ntBASIC5.36□□□□□ -1.55
MRE11P49959 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.36□□□□□ -1.55
MRE11P49959 TMED11P-201ENST00000479478 690 ntBASIC5.36□□□□□ -1.55
MRE11P49959 RPL7P38-201ENST00000488396 739 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms