Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC010733.1-201ENST00000451515 401 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.09□□□□□ -1.75
SOX2P48431 Z82190.1-201ENST00000454534 490 ntBASIC4.09□□□□□ -1.75
SOX2P48431 MTCO1P42-201ENST00000457379 726 ntBASIC4.09□□□□□ -1.75
SOX2P48431 RN7SL174P-201ENST00000475578 289 ntBASIC4.09□□□□□ -1.75
SOX2P48431 RN7SL41P-201ENST00000476144 297 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AC126182.1-201ENST00000478134 357 ntBASIC4.09□□□□□ -1.75
SOX2P48431 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.09□□□□□ -1.75
SOX2P48431 ACTR3P3-201ENST00000480448 893 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AC140172.1-201ENST00000502928 141 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.09□□□□□ -1.75
SOX2P48431 AC109927.2-201ENST00000506416 303 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AC091868.1-201ENST00000508746 304 ntBASIC4.09□□□□□ -1.75
SOX2P48431 RNA5SP360-201ENST00000516555 118 ntBASIC4.09□□□□□ -1.75
SOX2P48431 IGKV3D-34-201ENST00000522638 302 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.09□□□□□ -1.75
SOX2P48431 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.09□□□□□ -1.75
SOX2P48431 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.09□□□□□ -1.75
SOX2P48431 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.09□□□□□ -1.75
SOX2P48431 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.09□□□□□ -1.75
SOX2P48431 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.09□□□□□ -1.75
SOX2P48431 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SOX2P48431 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.09□□□□□ -1.75
SOX2P48431 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SOX2P48431 AC092470.1-201ENST00000546187 132 ntBASIC4.09□□□□□ -1.75
SOX2P48431 OR1F2P-201ENST00000570470 933 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AC053481.3-201ENST00000577881 843 ntBASIC4.09□□□□□ -1.75
SOX2P48431 MIR5699-201ENST00000578903 90 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AC022726.1-201ENST00000587475 207 ntBASIC4.09□□□□□ -1.75
SOX2P48431 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.09□□□□□ -1.75
SOX2P48431 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.09□□□□□ -1.75
SOX2P48431 AC020910.3-201ENST00000603701 874 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AC091965.4-201ENST00000607691 587 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AC126118.1-201ENST00000607744 628 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AC068944.2-201ENST00000610373 403 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AL355480.1-201ENST00000629041 99 ntBASIC4.09□□□□□ -1.75
SOX2P48431 FAM157B-203ENST00000639350 358 ntBASIC4.09□□□□□ -1.75
SOX2P48431 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.09□□□□□ -1.75
SOX2P48431 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SOX2P48431 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
SOX2P48431 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SOX2P48431 AP002001.2-201ENST00000529025 1469 ntBASIC4.09□□□□□ -1.75
SOX2P48431 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SOX2P48431 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SOX2P48431 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SOX2P48431 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX2P48431 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX2P48431 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SOX2P48431 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.08□□□□□ -1.76
SOX2P48431 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SOX2P48431 RN7SKP104-201ENST00000362605 328 ntBASIC4.08□□□□□ -1.76
SOX2P48431 RNU1-130P-201ENST00000363930 160 ntBASIC4.08□□□□□ -1.76
SOX2P48431 MIR223-201ENST00000385204 110 ntBASIC4.08□□□□□ -1.76
SOX2P48431 U3.30-201ENST00000391308 210 ntBASIC4.08□□□□□ -1.76
SOX2P48431 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.08□□□□□ -1.76
SOX2P48431 BTBD10P2-201ENST00000404779 676 ntBASIC4.08□□□□□ -1.76
SOX2P48431 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX2P48431 SNORA11.3-201ENST00000408471 128 ntBASIC4.08□□□□□ -1.76
SOX2P48431 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX2P48431 Y_RNA.608-201ENST00000410647 95 ntBASIC4.08□□□□□ -1.76
SOX2P48431 RPS3AP3-201ENST00000411933 242 ntBASIC4.08□□□□□ -1.76
SOX2P48431 MTATP6P27-201ENST00000416987 621 ntBASIC4.08□□□□□ -1.76
SOX2P48431 EIF1P1-201ENST00000421436 341 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AL645608.4-201ENST00000423619 154 ntBASIC4.08□□□□□ -1.76
SOX2P48431 RPL30P3-201ENST00000424262 333 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AL035410.1-201ENST00000427409 427 ntBASIC4.08□□□□□ -1.76
SOX2P48431 BX890604.2-201ENST00000427883 474 ntBASIC4.08□□□□□ -1.76
SOX2P48431 OR4F13P-201ENST00000428478 931 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX2P48431 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX2P48431 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.08□□□□□ -1.76
SOX2P48431 RPL7P11-201ENST00000437586 658 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AC073614.1-201ENST00000438690 650 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX2P48431 AC079168.2-201ENST00000453977 416 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AC099563.1-201ENST00000456086 418 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.08□□□□□ -1.76
SOX2P48431 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX2P48431 AP001025.2-201ENST00000490908 477 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.08□□□□□ -1.76
SOX2P48431 HIGD1AP14-201ENST00000507617 282 ntBASIC4.08□□□□□ -1.76
SOX2P48431 RN7SKP82-201ENST00000516786 223 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.08□□□□□ -1.76
SOX2P48431 AC022790.1-201ENST00000522872 204 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.08□□□□□ -1.76
SOX2P48431 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX2P48431 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX2P48431 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX2P48431 AP005119.2-201ENST00000579735 1105 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AC009977.1-201ENST00000586015 570 ntBASIC4.08□□□□□ -1.76
SOX2P48431 SLC25A36P1-201ENST00000590111 465 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AL359999.1-201ENST00000604513 294 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AL022154.1-201ENST00000604698 785 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AC008966.2-201ENST00000606157 453 ntBASIC4.08□□□□□ -1.76
SOX2P48431 AL513477.2-201ENST00000607858 568 ntBASIC4.08□□□□□ -1.76
SOX2P48431 FAM27B-201ENST00000610601 213 ntBASIC4.08□□□□□ -1.76
SOX2P48431 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.08□□□□□ -1.76
SOX2P48431 SNORA11.6-201ENST00000619030 128 ntBASIC4.08□□□□□ -1.76
SOX2P48431 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.08□□□□□ -1.76
SOX2P48431 OR5AK4P-201ENST00000635912 903 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms