Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC010486.1-201ENST00000511793 424 ntBASIC3.18□□□□□ -1.9
CXCL12P48061 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.18□□□□□ -1.9
CXCL12P48061 NDUFB9P3-201ENST00000521269 501 ntBASIC3.18□□□□□ -1.9
CXCL12P48061 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL12P48061 AC004923.2-201ENST00000529649 369 ntBASIC3.18□□□□□ -1.9
CXCL12P48061 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.18□□□□□ -1.9
CXCL12P48061 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL12P48061 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.18□□□□□ -1.9
CXCL12P48061 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.18□□□□□ -1.9
CXCL12P48061 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.18□□□□□ -1.9
CXCL12P48061 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CXCL12P48061 MIR548Y-201ENST00000582739 110 ntBASIC3.18□□□□□ -1.9
CXCL12P48061 AC104984.5-201ENST00000586878 94 ntBASIC3.18□□□□□ -1.9
CXCL12P48061 AL390838.2-201ENST00000602394 274 ntBASIC3.18□□□□□ -1.9
CXCL12P48061 AC103710.3-201ENST00000608157 948 ntBASIC3.18□□□□□ -1.9
CXCL12P48061 AL096803.3-201ENST00000609032 532 ntBASIC3.18□□□□□ -1.9
CXCL12P48061 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CXCL12P48061 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CXCL12P48061 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CXCL12P48061 AC018555.1-201ENST00000567548 1980 ntBASIC3.18□□□□□ -1.9
CXCL12P48061 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL12P48061 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL12P48061 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL12P48061 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL12P48061 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CXCL12P48061 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL12P48061 AL356057.1-202ENST00000402263 756 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 MTND4LP20-201ENST00000402379 270 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 HMGB3P18-201ENST00000406327 590 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 RNU4-74P-201ENST00000411280 161 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 AC105402.1-201ENST00000413336 545 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 AL356968.1-201ENST00000416622 474 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL12P48061 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CXCL12P48061 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL12P48061 RNU7-170P-201ENST00000459303 61 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 PRDX3P4-201ENST00000470828 747 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 RPL23AP71-201ENST00000470966 469 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL12P48061 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL12P48061 RPL7P47-201ENST00000497299 556 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 RNA5SP367-201ENST00000516557 118 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL12P48061 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.17□□□□□ -1.9
CXCL12P48061 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL12P48061 SNRPGP1-201ENST00000553864 222 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 AL360157.1-201ENST00000565962 87 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 MIR3945-201ENST00000581853 98 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 VN1R84P-201ENST00000593697 235 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 AC040174.2-201ENST00000602701 465 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 SUMO2P14-201ENST00000604488 293 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL12P48061 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL12P48061 CYCSP41-201ENST00000616920 296 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL12P48061 HPVC1-201ENST00000629899 1198 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CXCL12P48061 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL12P48061 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.17□□□□□ -1.9
CXCL12P48061 USP8P1-201ENST00000494673 3183 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CXCL12P48061 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL12P48061 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
CXCL12P48061 AL139811.1-201ENST00000424779 2299 ntBASIC3.17□□□□□ -1.9
CXCL12P48061 MTND4P21-201ENST00000453886 1357 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL12P48061 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.16□□□□□ -1.9
CXCL12P48061 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CXCL12P48061 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL12P48061 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL12P48061 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL12P48061 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.16□□□□□ -1.9
CXCL12P48061 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL12P48061 RNU6-328P-201ENST00000390887 106 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 Z98941.1-201ENST00000407764 100 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 MTND4P11-201ENST00000417020 1058 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 AC073464.3-201ENST00000422564 712 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 FAR1P1-201ENST00000427163 934 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL12P48061 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.16□□□□□ -1.9
CXCL12P48061 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL12P48061 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL12P48061 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL12P48061 HMGN2P7-201ENST00000456186 273 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL12P48061 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.16□□□□□ -1.9
CXCL12P48061 AC091826.1-201ENST00000514065 313 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.16□□□□□ -1.9
CXCL12P48061 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.16□□□□□ -1.9
CXCL12P48061 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.16□□□□□ -1.9
CXCL12P48061 AC106785.3-201ENST00000564064 847 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 CBX3P2-202ENST00000583365 535 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 PRELID3BP8-201ENST00000604148 295 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 AC012531.5-201ENST00000611375 151 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 uc_338.25-201ENST00000613756 156 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 AC139769.3-201ENST00000618383 175 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 AC015726.3-201ENST00000624501 418 ntBASIC3.16□□□□□ -1.9
CXCL12P48061 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.16□□□□□ -1.9
CXCL12P48061 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms