Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC139713.2-210ENST00000641741 992 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD4P46934 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
NEDD4P46934 AC134882.1-201ENST00000603738 1676 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD4P46934 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.97□□□□□ -1.77
NEDD4P46934 AL451142.2-201ENST00000429076 2090 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD4P46934 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
NEDD4P46934 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.96□□□□□ -1.77
NEDD4P46934 SNORA51.12-201ENST00000384448 134 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 SNORA11C-201ENST00000408532 129 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 RNU6-584P-201ENST00000410350 95 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 RPS12P23-201ENST00000419579 400 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 USP9YP21-201ENST00000420603 432 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.96□□□□□ -1.77
NEDD4P46934 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.96□□□□□ -1.77
NEDD4P46934 RPL23AP82-202ENST00000427528 469 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 AC005019.1-201ENST00000436455 431 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 AL645638.1-201ENST00000440519 361 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 RPL21P10-201ENST00000463521 490 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 CENPBD1P1-201ENST00000464061 469 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.96□□□□□ -1.77
NEDD4P46934 TRAV31-201ENST00000502780 342 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 WBP1LP4-201ENST00000505043 344 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NEDD4P46934 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.96□□□□□ -1.77
NEDD4P46934 RPL21P12-201ENST00000559810 515 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.96□□□□□ -1.77
NEDD4P46934 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.96□□□□□ -1.77
NEDD4P46934 AC008507.1-201ENST00000587506 734 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.96□□□□□ -1.77
NEDD4P46934 AC006557.5-201ENST00000603126 811 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 NTAN1P1-201ENST00000603150 646 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 ELOCP35-201ENST00000604289 336 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.96□□□□□ -1.77
NEDD4P46934 AL354976.1-201ENST00000613843 387 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 AC123768.4-201ENST00000616244 701 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 AC084757.4-201ENST00000616350 526 ntBASIC3.96□□□□□ -1.77
NEDD4P46934 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.96□□□□□ -1.77
NEDD4P46934 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.96□□□□□ -1.77
NEDD4P46934 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
NEDD4P46934 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD4P46934 RNU2-6P-201ENST00000411404 190 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC092638.1-201ENST00000411966 1275 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC126124.2-201ENST00000413542 321 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC063979.1-201ENST00000415539 377 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC234782.4-201ENST00000417646 1048 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.95□□□□□ -1.78
NEDD4P46934 ELOCP6-201ENST00000429066 328 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AL353597.2-202ENST00000434901 373 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AL929288.2-201ENST00000446368 407 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC008264.1-201ENST00000447612 367 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NEDD4P46934 DNAJC19P8-201ENST00000452887 259 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 BX248409.1-201ENST00000455497 255 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 ELOCP12-201ENST00000458706 328 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC023050.1-201ENST00000498198 304 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC020893.1-201ENST00000502452 580 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.95□□□□□ -1.78
NEDD4P46934 RNU6-276P-201ENST00000516114 96 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 RN7SKP60-201ENST00000516985 239 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 RNU6-1028P-201ENST00000517164 93 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC021451.1-201ENST00000523498 1129 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC104417.1-201ENST00000523974 751 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.95□□□□□ -1.78
NEDD4P46934 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.95□□□□□ -1.78
NEDD4P46934 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.95□□□□□ -1.78
NEDD4P46934 TGIF1P1-201ENST00000558095 802 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.95□□□□□ -1.78
NEDD4P46934 AC115085.1-201ENST00000588924 229 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.95□□□□□ -1.78
NEDD4P46934 AC073387.2-201ENST00000604797 784 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC017076.1-201ENST00000607613 578 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AL121594.5-201ENST00000631724 573 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.95□□□□□ -1.78
NEDD4P46934 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD4P46934 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.95□□□□□ -1.78
NEDD4P46934 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD4P46934 AL353743.4-201ENST00000422653 1547 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.95□□□□□ -1.78
NEDD4P46934 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD4P46934 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD4P46934 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD4P46934 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NEDD4P46934 AL603865.2-201ENST00000401679 213 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 MTATP6P31-201ENST00000406985 692 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 RNA5SP44-201ENST00000410446 133 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 RPS7P13-201ENST00000413955 498 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AL513174.1-201ENST00000423182 629 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.95□□□□□ -1.78
NEDD4P46934 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AC005326.1-201ENST00000429197 123 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.95□□□□□ -1.78
NEDD4P46934 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.95□□□□□ -1.78
NEDD4P46934 AL162388.1-201ENST00000450912 352 ntBASIC3.95□□□□□ -1.78
NEDD4P46934 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.95□□□□□ -1.78
NEDD4P46934 RPL6P9-201ENST00000466502 859 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms