Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-1P43699 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.55□□□□□ -1.84
NKX2-1P43699 FAR2P4-202ENST00000425399 584 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AL590103.1-201ENST00000434488 307 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 RPS25P9-201ENST00000435591 252 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-1P43699 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-1P43699 AC073648.4-201ENST00000442655 781 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 RPL36AP15-201ENST00000444514 266 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-1P43699 HMGB3P30-201ENST00000457863 606 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 RN7SL329P-201ENST00000467740 299 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.55□□□□□ -1.84
NKX2-1P43699 RPL23AP2-201ENST00000471227 466 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC006517.1-201ENST00000480485 328 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 MTCYBP17-201ENST00000503579 789 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC025554.1-201ENST00000505641 188 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 ATP1B1P1-201ENST00000509767 915 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 HSPE1P23-201ENST00000509838 286 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-1P43699 BTF3P13-201ENST00000513224 490 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC110775.1-201ENST00000513721 462 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-1P43699 Vault.1-201ENST00000516474 102 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.55□□□□□ -1.84
NKX2-1P43699 AC021006.3-201ENST00000530771 192 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AP001880.2-201ENST00000538233 448 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.55□□□□□ -1.84
NKX2-1P43699 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.55□□□□□ -1.84
NKX2-1P43699 AL352979.3-201ENST00000553515 247 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.55□□□□□ -1.84
NKX2-1P43699 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.55□□□□□ -1.84
NKX2-1P43699 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-1P43699 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-1P43699 AC136618.2-201ENST00000575091 400 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 LARP7P2-201ENST00000575306 125 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX2-1P43699 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-1P43699 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.55□□□□□ -1.84
NKX2-1P43699 AC068790.5-201ENST00000602741 355 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 BNIP3P11-201ENST00000603878 563 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC010738.1-201ENST00000604970 987 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC025588.4-201ENST00000615802 908 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC231657.1-201ENST00000624313 397 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 PCMTD1P7-201ENST00000634506 357 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX2-1P43699 AC125257.1-201ENST00000560400 2930 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
NKX2-1P43699 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.55□□□□□ -1.84
NKX2-1P43699 SDAD1P1-202ENST00000524156 2051 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.54□□□□□ -1.84
NKX2-1P43699 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-1P43699 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
NKX2-1P43699 AC021146.4-201ENST00000309229 279 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 RN7SKP149-201ENST00000363008 344 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 SNORA4.1-201ENST00000364263 144 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 RNU6-821P-201ENST00000390995 107 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 SNORD66.1-201ENST00000391230 76 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 RPL23AP29-201ENST00000397284 453 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 RN7SKP177-201ENST00000410567 355 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 AL953862.1-201ENST00000423016 168 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 EZH2P1-201ENST00000431167 291 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 AC098826.1-201ENST00000433943 471 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX2-1P43699 RPL23AP43-201ENST00000446445 471 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 RNU7-125P-201ENST00000458760 62 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 RPL7P1-201ENST00000468161 747 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 RPL7P9-201ENST00000468715 747 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 RPL7P16-201ENST00000479738 738 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 AC010625.1-201ENST00000511296 403 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 RNY4P37-201ENST00000516225 96 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.54□□□□□ -1.84
NKX2-1P43699 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX2-1P43699 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX2-1P43699 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.54□□□□□ -1.84
NKX2-1P43699 AC007954.1-201ENST00000554198 494 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-1P43699 AL133457.1-201ENST00000564251 987 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-1P43699 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX2-1P43699 MIR5186-201ENST00000577504 120 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 NBR2-204ENST00000587322 63 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.54□□□□□ -1.84
NKX2-1P43699 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 AL133338.2-201ENST00000604292 736 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 AC024560.3-201ENST00000608482 349 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 MIR7155-201ENST00000615925 56 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.54□□□□□ -1.84
NKX2-1P43699 MIR7702-201ENST00000621931 59 ntBASIC3.54□□□□□ -1.84
NKX2-1P43699 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms