Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN9P43378 ZNF705CP-201ENST00000530515 889 ntBASIC4.32□□□□□ -1.72
PTPN9P43378 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN9P43378 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN9P43378 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN9P43378 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PTPN9P43378 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN9P43378 AC010620.1-201ENST00000601088 1102 ntBASIC4.32□□□□□ -1.72
PTPN9P43378 AC008638.3-201ENST00000603341 463 ntBASIC4.32□□□□□ -1.72
PTPN9P43378 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.32□□□□□ -1.72
PTPN9P43378 AC124312.4-201ENST00000605533 310 ntBASIC4.32□□□□□ -1.72
PTPN9P43378 AC064807.4-201ENST00000607201 407 ntBASIC4.32□□□□□ -1.72
PTPN9P43378 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN9P43378 AC009090.3-201ENST00000616553 565 ntBASIC4.32□□□□□ -1.72
PTPN9P43378 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN9P43378 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN9P43378 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN9P43378 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN9P43378 MAPK10-253ENST00000641010 4072 ntBASIC4.32□□□□□ -1.72
PTPN9P43378 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN9P43378 AL079343.1-201ENST00000572358 1771 ntBASIC4.32□□□□□ -1.72
PTPN9P43378 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN9P43378 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN9P43378 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN9P43378 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTPN9P43378 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN9P43378 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN9P43378 DDX43P2-201ENST00000604753 1354 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 AL122126.1-201ENST00000546905 1318 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN9P43378 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN9P43378 MIR93-201ENST00000385024 80 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTPN9P43378 AL603766.1-201ENST00000407763 664 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 PIGPP2-201ENST00000411569 458 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.31□□□□□ -1.72
PTPN9P43378 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPN9P43378 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.31□□□□□ -1.72
PTPN9P43378 COX6CP15-201ENST00000426313 211 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN9P43378 MTND4P6-201ENST00000438297 472 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN9P43378 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPN9P43378 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN9P43378 AC009220.1-201ENST00000451614 275 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN9P43378 TRBV26-201ENST00000456572 344 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 RPS20P21-201ENST00000466859 343 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 RPL7P1-201ENST00000468161 747 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 RPL7P9-201ENST00000468715 747 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.31□□□□□ -1.72
PTPN9P43378 AC025554.1-201ENST00000505641 188 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 AC005178.1-201ENST00000508392 440 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN9P43378 RNA5SP154-201ENST00000516193 111 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 AC135279.1-201ENST00000543493 504 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 LSM6P2-201ENST00000552208 177 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
PTPN9P43378 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPN9P43378 AC007599.1-201ENST00000568688 1174 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 KPNA2P3-201ENST00000584190 848 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN9P43378 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPN9P43378 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN9P43378 AC010857.1-201ENST00000606398 594 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPN9P43378 AL607023.1-201ENST00000620045 248 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 AC010608.2-201ENST00000624830 470 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.31□□□□□ -1.72
PTPN9P43378 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN9P43378 MIR6715B-201ENST00000637172 77 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 OR52H1-202ENST00000641796 1061 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 Z73965.1-201ENST00000623412 2297 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN9P43378 AC087359.1-201ENST00000508335 1740 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 AC009951.1-201ENST00000623674 2614 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PTPN9P43378 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PTPN9P43378 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN9P43378 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN9P43378 AL049555.1-201ENST00000562834 1933 ntBASIC4.31□□□□□ -1.72
PTPN9P43378 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN9P43378 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN9P43378 OR5BR1P-201ENST00000524992 1330 ntBASIC4.3□□□□□ -1.72
PTPN9P43378 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN9P43378 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN9P43378 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN9P43378 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PTPN9P43378 SNORD116-1-201ENST00000384335 95 ntBASIC4.3□□□□□ -1.72
PTPN9P43378 MIR141-201ENST00000384975 95 ntBASIC4.3□□□□□ -1.72
PTPN9P43378 RPL23AP29-201ENST00000397284 453 ntBASIC4.3□□□□□ -1.72
PTPN9P43378 ZNF603P-201ENST00000405613 487 ntBASIC4.3□□□□□ -1.72
PTPN9P43378 RN7SKP33-201ENST00000410942 340 ntBASIC4.3□□□□□ -1.72
PTPN9P43378 PGBD4P8-201ENST00000412993 562 ntBASIC4.3□□□□□ -1.72
PTPN9P43378 RPL31P2-201ENST00000413849 377 ntBASIC4.3□□□□□ -1.72
PTPN9P43378 RAC1P3-201ENST00000416129 580 ntBASIC4.3□□□□□ -1.72
PTPN9P43378 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN9P43378 AC019178.2-201ENST00000423595 505 ntBASIC4.3□□□□□ -1.72
PTPN9P43378 RPL23AP38-201ENST00000423801 469 ntBASIC4.3□□□□□ -1.72
PTPN9P43378 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms