Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.94□□□□□ -1.78
HNF4AP41235 OR8G2P-201ENST00000412796 908 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HNF4AP41235 AC092648.1-201ENST00000425870 423 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.94□□□□□ -1.78
HNF4AP41235 KCTD10P1-201ENST00000434203 625 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.94□□□□□ -1.78
HNF4AP41235 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.94□□□□□ -1.78
HNF4AP41235 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.94□□□□□ -1.78
HNF4AP41235 RPL7P52-201ENST00000449200 742 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.94□□□□□ -1.78
HNF4AP41235 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.94□□□□□ -1.78
HNF4AP41235 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.94□□□□□ -1.78
HNF4AP41235 VPS26AP1-201ENST00000483197 979 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 RN7SL604P-201ENST00000492589 296 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 RPS27AP13-201ENST00000498403 237 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 MTCYBP35-201ENST00000503630 1137 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 MTCYBP37-201ENST00000510642 1133 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HNF4AP41235 MTCO2P32-201ENST00000514865 403 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.94□□□□□ -1.78
HNF4AP41235 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.94□□□□□ -1.78
HNF4AP41235 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.94□□□□□ -1.78
HNF4AP41235 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.94□□□□□ -1.78
HNF4AP41235 MIR5684-201ENST00000585074 65 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.94□□□□□ -1.78
HNF4AP41235 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.94□□□□□ -1.78
HNF4AP41235 AC114878.2-201ENST00000604863 1251 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 Z99289.3-201ENST00000605586 594 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 AC128687.2-201ENST00000609657 566 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 MIR6716-201ENST00000613413 80 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 AC048344.4-201ENST00000619744 527 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HNF4AP41235 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.94□□□□□ -1.78
HNF4AP41235 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HNF4AP41235 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HNF4AP41235 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.94□□□□□ -1.78
HNF4AP41235 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.94□□□□□ -1.78
HNF4AP41235 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HNF4AP41235 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.93□□□□□ -1.78
HNF4AP41235 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HNF4AP41235 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HNF4AP41235 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HNF4AP41235 RNU6-1249P-201ENST00000363237 111 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 RNU1-89P-201ENST00000384592 164 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HNF4AP41235 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 MIR1251-201ENST00000408552 70 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.93□□□□□ -1.78
HNF4AP41235 RPS7P15-201ENST00000415804 584 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AC108032.1-201ENST00000416706 207 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.93□□□□□ -1.78
HNF4AP41235 XKRYP1-201ENST00000423438 492 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.93□□□□□ -1.78
HNF4AP41235 AC017083.1-201ENST00000428093 483 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AL358472.1-201ENST00000431295 329 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 XKRYP2-201ENST00000432915 492 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AC241584.1-201ENST00000438469 1241 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 SNORA71B-202ENST00000439232 272 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AC127537.2-201ENST00000439258 465 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.93□□□□□ -1.78
HNF4AP41235 RPS4XP4-201ENST00000443195 763 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.93□□□□□ -1.78
HNF4AP41235 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HNF4AP41235 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.93□□□□□ -1.78
HNF4AP41235 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.93□□□□□ -1.78
HNF4AP41235 SNORD11.1-201ENST00000459482 85 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.93□□□□□ -1.78
HNF4AP41235 AC134050.1-201ENST00000495088 933 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 PRELID3BP5-201ENST00000508612 460 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.93□□□□□ -1.78
HNF4AP41235 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.93□□□□□ -1.78
HNF4AP41235 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.93□□□□□ -1.78
HNF4AP41235 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.93□□□□□ -1.78
HNF4AP41235 AC092851.1-201ENST00000535964 478 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.93□□□□□ -1.78
HNF4AP41235 AC087897.1-201ENST00000550134 156 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.93□□□□□ -1.78
HNF4AP41235 SULT1C2P1-202ENST00000562418 459 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AC025627.2-201ENST00000576220 160 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 RN7SL600P-201ENST00000581811 299 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HNF4AP41235 AC011468.4-201ENST00000603942 409 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.93□□□□□ -1.78
HNF4AP41235 AP003973.1-201ENST00000604639 691 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AL590392.1-201ENST00000604960 446 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AP005137.2-201ENST00000609238 400 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AC004908.3-201ENST00000610248 625 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AC006329.2-201ENST00000611491 394 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 MIR7151-201ENST00000617477 60 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AP000676.4-201ENST00000624659 623 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.93□□□□□ -1.78
HNF4AP41235 AL773545.4-201ENST00000637262 310 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 AL513478.4-201ENST00000641636 310 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HNF4AP41235 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.93□□□□□ -1.78
HNF4AP41235 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HNF4AP41235 AL672296.1-201ENST00000427780 2158 ntBASIC3.93□□□□□ -1.78
HNF4AP41235 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms