Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.4□□□□□ -1.87
RORAP35398 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 AC104229.1-201ENST00000561364 255 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC106734.1-201ENST00000568646 663 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.4□□□□□ -1.87
RORAP35398 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 ELOCP35-201ENST00000604289 336 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC011816.2-201ENST00000607089 556 ntBASIC3.4□□□□□ -1.87
RORAP35398 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.4□□□□□ -1.87
RORAP35398 MIR7851-201ENST00000610611 160 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC099778.2-201ENST00000610904 211 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC096577.2-201ENST00000611455 153 ntBASIC3.4□□□□□ -1.87
RORAP35398 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
RORAP35398 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.4□□□□□ -1.87
RORAP35398 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.4□□□□□ -1.87
RORAP35398 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RORAP35398 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
RORAP35398 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RORAP35398 AC006504.1-201ENST00000562493 3666 ntBASIC3.4□□□□□ -1.87
RORAP35398 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.4□□□□□ -1.87
RORAP35398 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RORAP35398 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.39□□□□□ -1.87
RORAP35398 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RORAP35398 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RORAP35398 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RORAP35398 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RORAP35398 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RORAP35398 ATF1P1-201ENST00000406040 927 ntBASIC3.39□□□□□ -1.87
RORAP35398 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.39□□□□□ -1.87
RORAP35398 RPL21P66-201ENST00000426566 466 ntBASIC3.39□□□□□ -1.87
RORAP35398 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RORAP35398 AL590103.1-201ENST00000434488 307 ntBASIC3.39□□□□□ -1.87
RORAP35398 AL512661.1-201ENST00000434586 1253 ntBASIC3.39□□□□□ -1.87
RORAP35398 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.39□□□□□ -1.87
RORAP35398 MRPL35P4-201ENST00000453682 566 ntBASIC3.39□□□□□ -1.87
RORAP35398 AC006539.3-201ENST00000454258 129 ntBASIC3.39□□□□□ -1.87
RORAP35398 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.39□□□□□ -1.87
RORAP35398 HMGN2P16-201ENST00000456802 261 ntBASIC3.39□□□□□ -1.87
RORAP35398 AC092754.2-201ENST00000463506 460 ntBASIC3.39□□□□□ -1.87
RORAP35398 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.39□□□□□ -1.87
RORAP35398 AC126121.1-201ENST00000482313 553 ntBASIC3.39□□□□□ -1.87
RORAP35398 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.39□□□□□ -1.87
RORAP35398 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.39□□□□□ -1.87
RORAP35398 PHBP14-201ENST00000512887 367 ntBASIC3.39□□□□□ -1.87
RORAP35398 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.39□□□□□ -1.87
RORAP35398 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.39□□□□□ -1.87
RORAP35398 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.39□□□□□ -1.87
RORAP35398 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.39□□□□□ -1.87
RORAP35398 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.39□□□□□ -1.87
RORAP35398 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.39□□□□□ -1.87
RORAP35398 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RORAP35398 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.39□□□□□ -1.87
RORAP35398 AC023161.2-201ENST00000551218 780 ntBASIC3.39□□□□□ -1.87
RORAP35398 AL442163.2-201ENST00000553912 710 ntBASIC3.39□□□□□ -1.87
RORAP35398 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.39□□□□□ -1.87
RORAP35398 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.39□□□□□ -1.87
RORAP35398 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.39□□□□□ -1.87
RORAP35398 KLKP1-201ENST00000595979 403 ntBASIC3.39□□□□□ -1.87
RORAP35398 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.39□□□□□ -1.87
RORAP35398 YWHAQP7-201ENST00000603536 658 ntBASIC3.39□□□□□ -1.87
RORAP35398 AL161756.2-201ENST00000604597 246 ntBASIC3.39□□□□□ -1.87
RORAP35398 AL365503.1-201ENST00000605247 905 ntBASIC3.39□□□□□ -1.87
RORAP35398 AL159169.3-201ENST00000608871 561 ntBASIC3.39□□□□□ -1.87
RORAP35398 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.39□□□□□ -1.87
RORAP35398 AC073592.7-201ENST00000623659 507 ntBASIC3.39□□□□□ -1.87
RORAP35398 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RORAP35398 AL732372.2-225ENST00000642124 456 ntBASIC3.39□□□□□ -1.87
RORAP35398 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RORAP35398 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RORAP35398 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.39□□□□□ -1.87
RORAP35398 AC010733.2-201ENST00000589496 5702 ntBASIC3.39□□□□□ -1.87
RORAP35398 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.39□□□□□ -1.87
RORAP35398 MFSD8-213ENST00000641134 1327 ntBASIC3.39□□□□□ -1.87
RORAP35398 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.39□□□□□ -1.87
RORAP35398 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RORAP35398 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RORAP35398 SEC63P2-201ENST00000503863 1939 ntBASIC3.38□□□□□ -1.87
RORAP35398 ZNF826P-207ENST00000622273 1910 ntBASIC3.38□□□□□ -1.87
RORAP35398 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RORAP35398 AL356274.2-201ENST00000624379 3752 ntBASIC3.38□□□□□ -1.87
RORAP35398 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RORAP35398 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.38□□□□□ -1.87
RORAP35398 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RORAP35398 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RORAP35398 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.38□□□□□ -1.87
RORAP35398 RNVU1-14-201ENST00000384770 164 ntBASIC3.38□□□□□ -1.87
RORAP35398 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RORAP35398 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RORAP35398 PRRC2CP1-201ENST00000404428 159 ntBASIC3.38□□□□□ -1.87
RORAP35398 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.38□□□□□ -1.87
RORAP35398 AL445183.3-201ENST00000414168 502 ntBASIC3.38□□□□□ -1.87
RORAP35398 LIPT1P1-201ENST00000415870 1186 ntBASIC3.38□□□□□ -1.87
RORAP35398 AL158050.1-201ENST00000416077 457 ntBASIC3.38□□□□□ -1.87
RORAP35398 DBIP2-201ENST00000419076 262 ntBASIC3.38□□□□□ -1.87
RORAP35398 AC097713.2-201ENST00000430199 356 ntBASIC3.38□□□□□ -1.87
RORAP35398 ETF1P3-201ENST00000430422 1160 ntBASIC3.38□□□□□ -1.87
RORAP35398 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms