Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.32□□□□□ -1.4
VARSP26640 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.32□□□□□ -1.4
VARSP26640 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.32□□□□□ -1.4
VARSP26640 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.32□□□□□ -1.4
VARSP26640 AC006967.1-201ENST00000467608 589 ntBASIC6.32□□□□□ -1.4
VARSP26640 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.32□□□□□ -1.4
VARSP26640 PGAM1P13-201ENST00000507497 754 ntBASIC6.32□□□□□ -1.4
VARSP26640 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.32□□□□□ -1.4
VARSP26640 SNORA25.11-201ENST00000515935 105 ntBASIC6.32□□□□□ -1.4
VARSP26640 SNORA14.1-201ENST00000516113 141 ntBASIC6.32□□□□□ -1.4
VARSP26640 RNU6-570P-201ENST00000517051 105 ntBASIC6.32□□□□□ -1.4
VARSP26640 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VARSP26640 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC6.32□□□□□ -1.4
VARSP26640 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.32□□□□□ -1.4
VARSP26640 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VARSP26640 AC084783.1-201ENST00000565846 910 ntBASIC6.32□□□□□ -1.4
VARSP26640 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.32□□□□□ -1.4
VARSP26640 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
VARSP26640 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.32□□□□□ -1.4
VARSP26640 AC012433.1-201ENST00000588916 398 ntBASIC6.32□□□□□ -1.4
VARSP26640 HMGB2P1-201ENST00000591146 634 ntBASIC6.32□□□□□ -1.4
VARSP26640 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.32□□□□□ -1.4
VARSP26640 AP001264.1-201ENST00000620602 703 ntBASIC6.32□□□□□ -1.4
VARSP26640 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.32□□□□□ -1.4
VARSP26640 AC132825.6-201ENST00000638861 357 ntBASIC6.32□□□□□ -1.4
VARSP26640 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VARSP26640 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARSP26640 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARSP26640 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
VARSP26640 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARSP26640 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.32□□□□□ -1.4
VARSP26640 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARSP26640 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
VARSP26640 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
VARSP26640 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VARSP26640 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VARSP26640 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VARSP26640 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
VARSP26640 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
VARSP26640 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VARSP26640 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VARSP26640 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VARSP26640 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.31□□□□□ -1.4
VARSP26640 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
VARSP26640 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
VARSP26640 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
VARSP26640 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VARSP26640 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
VARSP26640 AC093671.1-201ENST00000624981 2929 ntBASIC6.31□□□□□ -1.4
VARSP26640 RNA5SP435-201ENST00000364044 108 ntBASIC6.31□□□□□ -1.4
VARSP26640 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.31□□□□□ -1.4
VARSP26640 RNU6-662P-201ENST00000384253 104 ntBASIC6.31□□□□□ -1.4
VARSP26640 SNORD70.1-201ENST00000391007 85 ntBASIC6.31□□□□□ -1.4
VARSP26640 PPIAP9-201ENST00000403866 498 ntBASIC6.31□□□□□ -1.4
VARSP26640 RPLP0P7-201ENST00000416050 667 ntBASIC6.31□□□□□ -1.4
VARSP26640 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.31□□□□□ -1.4
VARSP26640 GAPDHP37-201ENST00000442317 968 ntBASIC6.31□□□□□ -1.4
VARSP26640 RPS3AP12-201ENST00000443616 753 ntBASIC6.31□□□□□ -1.4
VARSP26640 AC243772.1-201ENST00000451620 410 ntBASIC6.31□□□□□ -1.4
VARSP26640 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.31□□□□□ -1.4
VARSP26640 AL136126.1-201ENST00000473603 402 ntBASIC6.31□□□□□ -1.4
VARSP26640 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC6.31□□□□□ -1.4
VARSP26640 AC011005.2-201ENST00000487324 359 ntBASIC6.31□□□□□ -1.4
VARSP26640 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VARSP26640 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.31□□□□□ -1.4
VARSP26640 RNU6-323P-201ENST00000521915 107 ntBASIC6.31□□□□□ -1.4
VARSP26640 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.31□□□□□ -1.4
VARSP26640 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.31□□□□□ -1.4
VARSP26640 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.31□□□□□ -1.4
VARSP26640 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.31□□□□□ -1.4
VARSP26640 AC026956.1-201ENST00000558741 396 ntBASIC6.31□□□□□ -1.4
VARSP26640 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.31□□□□□ -1.4
VARSP26640 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.31□□□□□ -1.4
VARSP26640 MIR5188-201ENST00000583467 113 ntBASIC6.31□□□□□ -1.4
VARSP26640 AC009779.6-201ENST00000603972 165 ntBASIC6.31□□□□□ -1.4
VARSP26640 AC145423.1-201ENST00000605712 336 ntBASIC6.31□□□□□ -1.4
VARSP26640 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VARSP26640 AL161423.1-201ENST00000613700 262 ntBASIC6.31□□□□□ -1.4
VARSP26640 AC004792.1-201ENST00000614523 137 ntBASIC6.31□□□□□ -1.4
VARSP26640 MIR4272-201ENST00000635924 64 ntBASIC6.31□□□□□ -1.4
VARSP26640 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC6.31□□□□□ -1.4
VARSP26640 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.31□□□□□ -1.4
VARSP26640 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VARSP26640 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
VARSP26640 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
VARSP26640 AC074141.1-201ENST00000588129 2995 ntBASIC6.31□□□□□ -1.4
VARSP26640 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.31□□□□□ -1.4
VARSP26640 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VARSP26640 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.31□□□□□ -1.4
VARSP26640 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.31□□□□□ -1.4
VARSP26640 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.31□□□□□ -1.4
VARSP26640 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
VARSP26640 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
VARSP26640 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.31□□□□□ -1.4
VARSP26640 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
VARSP26640 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.3□□□□□ -1.4
VARSP26640 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
VARSP26640 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.3□□□□□ -1.4
VARSP26640 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.3□□□□□ -1.4
VARSP26640 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms