Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH3P22223 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH3P22223 RNU1-64P-201ENST00000365443 163 ntBASIC3.91□□□□□ -1.78
CDH3P22223 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH3P22223 RNU6-328P-201ENST00000390887 106 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH3P22223 PGBD4P8-201ENST00000412993 562 ntBASIC3.91□□□□□ -1.78
CDH3P22223 HIGD1AP15-201ENST00000416198 280 ntBASIC3.91□□□□□ -1.78
CDH3P22223 RPL22P18-201ENST00000417197 377 ntBASIC3.91□□□□□ -1.78
CDH3P22223 ELOCP9-201ENST00000418624 239 ntBASIC3.91□□□□□ -1.78
CDH3P22223 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH3P22223 RPL7P44-201ENST00000424827 742 ntBASIC3.91□□□□□ -1.78
CDH3P22223 OR8F1P-201ENST00000425243 930 ntBASIC3.91□□□□□ -1.78
CDH3P22223 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH3P22223 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH3P22223 AL358472.1-201ENST00000431295 329 ntBASIC3.91□□□□□ -1.78
CDH3P22223 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH3P22223 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH3P22223 AC093155.1-201ENST00000440164 826 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH3P22223 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH3P22223 PTENP1-201ENST00000447117 1215 ntBASIC3.91□□□□□ -1.78
CDH3P22223 Z99714.1-201ENST00000450463 807 ntBASIC3.91□□□□□ -1.78
CDH3P22223 USP9YP25-201ENST00000457708 443 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH3P22223 AC011979.1-201ENST00000472300 483 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH3P22223 VPS26AP1-201ENST00000483197 979 ntBASIC3.91□□□□□ -1.78
CDH3P22223 UBE2CP3-201ENST00000502715 450 ntBASIC3.91□□□□□ -1.78
CDH3P22223 FTH1P21-201ENST00000512179 511 ntBASIC3.91□□□□□ -1.78
CDH3P22223 RNU7-143P-201ENST00000516781 65 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH3P22223 AP001207.1-201ENST00000524051 481 ntBASIC3.91□□□□□ -1.78
CDH3P22223 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH3P22223 AP001317.1-201ENST00000531194 960 ntBASIC3.91□□□□□ -1.78
CDH3P22223 OR5D17P-201ENST00000531492 978 ntBASIC3.91□□□□□ -1.78
CDH3P22223 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CDH3P22223 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH3P22223 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.91□□□□□ -1.78
CDH3P22223 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
CDH3P22223 AADACP1-206ENST00000561502 1193 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AC120057.2-201ENST00000571520 271 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH3P22223 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH3P22223 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH3P22223 AC091057.2-201ENST00000602594 792 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AC113368.1-201ENST00000603736 382 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AC069545.1-201ENST00000605671 358 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AP003392.5-201ENST00000607857 415 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AC092106.3-201ENST00000611308 722 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AC011330.2-201ENST00000621680 635 ntBASIC3.91□□□□□ -1.78
CDH3P22223 MIR6500-201ENST00000622700 86 ntBASIC3.91□□□□□ -1.78
CDH3P22223 AC006927.4-201ENST00000639187 543 ntBASIC3.91□□□□□ -1.78
CDH3P22223 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH3P22223 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CDH3P22223 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH3P22223 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH3P22223 NCAPGP1-201ENST00000505112 1814 ntBASIC3.91□□□□□ -1.78
CDH3P22223 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH3P22223 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH3P22223 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH3P22223 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH3P22223 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH3P22223 AL157700.1-201ENST00000561973 1432 ntBASIC3.9□□□□□ -1.78
CDH3P22223 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDH3P22223 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH3P22223 NACA3P-201ENST00000359690 648 ntBASIC3.9□□□□□ -1.79
CDH3P22223 RNU4-28P-201ENST00000364739 141 ntBASIC3.9□□□□□ -1.79
CDH3P22223 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.9□□□□□ -1.79
CDH3P22223 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
CDH3P22223 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH3P22223 AC007435.1-201ENST00000421086 415 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AL159169.1-201ENST00000421119 127 ntBASIC3.9□□□□□ -1.79
CDH3P22223 DPRXP1-201ENST00000426312 460 ntBASIC3.9□□□□□ -1.79
CDH3P22223 RPP40P1-201ENST00000426762 456 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH3P22223 AL513175.1-201ENST00000431492 780 ntBASIC3.9□□□□□ -1.79
CDH3P22223 KCTD10P1-201ENST00000434203 625 ntBASIC3.9□□□□□ -1.79
CDH3P22223 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH3P22223 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH3P22223 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH3P22223 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH3P22223 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH3P22223 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH3P22223 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH3P22223 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH3P22223 AL139824.2-201ENST00000458731 1095 ntBASIC3.9□□□□□ -1.79
CDH3P22223 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH3P22223 AC010460.1-201ENST00000507087 466 ntBASIC3.9□□□□□ -1.79
CDH3P22223 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH3P22223 AC021146.1-201ENST00000511202 716 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH3P22223 AC005798.1-201ENST00000513715 387 ntBASIC3.9□□□□□ -1.79
CDH3P22223 MTND4LP31-201ENST00000514859 294 ntBASIC3.9□□□□□ -1.79
CDH3P22223 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH3P22223 RNU6-488P-201ENST00000515918 99 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH3P22223 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
CDH3P22223 MTCO2P15-201ENST00000532655 656 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AC074029.1-201ENST00000552531 1044 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms