Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC4P09017 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC4P09017 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC4P09017 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC4P09017 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC4P09017 MTND1P8-201ENST00000571424 950 ntBASIC3.36□□□□□ -1.87
HOXC4P09017 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC4P09017 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC4P09017 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC4P09017 AC015849.2-201ENST00000605738 409 ntBASIC3.36□□□□□ -1.87
HOXC4P09017 AC018754.1-201ENST00000607486 925 ntBASIC3.36□□□□□ -1.87
HOXC4P09017 AC097504.2-201ENST00000608088 454 ntBASIC3.36□□□□□ -1.87
HOXC4P09017 AL450489.1-201ENST00000612071 468 ntBASIC3.36□□□□□ -1.87
HOXC4P09017 AL592295.2-201ENST00000612578 206 ntBASIC3.36□□□□□ -1.87
HOXC4P09017 AC025016.1-201ENST00000616746 682 ntBASIC3.36□□□□□ -1.87
HOXC4P09017 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC4P09017 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.36□□□□□ -1.87
HOXC4P09017 AC099654.8-201ENST00000637757 681 ntBASIC3.36□□□□□ -1.87
HOXC4P09017 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC4P09017 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HOXC4P09017 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC4P09017 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC4P09017 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC4P09017 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC4P09017 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC4P09017 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
HOXC4P09017 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 RNU6-650P-201ENST00000365658 111 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 MIR122-201ENST00000385044 85 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 TAF9BP1-201ENST00000396646 746 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 ATP5F1P6-201ENST00000402768 767 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXC4P09017 AC004987.3-201ENST00000413879 771 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 AIMP1P1-201ENST00000418670 937 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 ARL2BPP3-201ENST00000421226 480 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AC092832.1-201ENST00000422934 400 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 RPF2P1-201ENST00000424137 906 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 MTCO2P17-201ENST00000424336 677 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXC4P09017 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC4P09017 AC005300.1-201ENST00000428401 373 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 ZNF965P-201ENST00000432501 817 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AC011242.1-201ENST00000433596 1158 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AC007000.2-201ENST00000442564 487 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 RPS3AP12-201ENST00000443616 753 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AL606517.1-201ENST00000446914 387 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AC092685.1-201ENST00000447960 1243 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 RPS4XP10-201ENST00000465034 731 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC4P09017 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC4P09017 RNU6-334P-201ENST00000517072 102 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
HOXC4P09017 AC008562.1-201ENST00000521763 330 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.35□□□□□ -1.87
HOXC4P09017 OR5AP1P-201ENST00000529730 940 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 AL121576.1-201ENST00000556055 276 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.35□□□□□ -1.87
HOXC4P09017 AC093510.2-201ENST00000562820 896 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AL845331.3-202ENST00000562856 261 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AC090751.1-201ENST00000566966 267 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC4P09017 AP000919.1-202ENST00000581139 1264 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AC067852.3-201ENST00000589177 561 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 YPEL5P2-201ENST00000605553 359 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 AC004775.1-201ENST00000607389 753 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 MIR8058-201ENST00000615737 89 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 MIR6864-201ENST00000617935 70 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 AC110801.1-201ENST00000623590 212 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 OR4G3P-201ENST00000633500 913 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HOXC4P09017 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXC4P09017 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 AC000367.1-201ENST00000452711 1766 ntBASIC3.35□□□□□ -1.87
HOXC4P09017 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HOXC4P09017 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC4P09017 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC4P09017 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXC4P09017 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC4P09017 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms