Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC092435.4-201ENST00000623012 4159 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SMAD6O43541 XIAPP3-201ENST00000312918 795 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 RNU4-21P-201ENST00000362802 126 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 RNU6-931P-201ENST00000363850 107 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 RNA5SP515-201ENST00000364570 118 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 RNA5SP479-201ENST00000364858 117 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 OR1L1-202ENST00000373686 1083 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 MIR3074-201ENST00000384885 81 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 RPS26P8-201ENST00000393490 348 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 ATP5F1P4-201ENST00000397288 746 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 RPL7P8-201ENST00000411964 730 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AL161449.1-201ENST00000414531 1199 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 UBTFL3-201ENST00000418934 1024 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.28□□□□□ -1.72
SMAD6O43541 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.28□□□□□ -1.72
SMAD6O43541 AL590103.1-201ENST00000434488 307 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 USP9YP35-201ENST00000435696 412 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 COX6CP2-201ENST00000444980 225 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SMAD6O43541 KATNBL1P6-201ENST00000453433 915 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 CFTRP1-201ENST00000456646 183 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 RPL21P71-201ENST00000465598 459 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 UBTFL6-201ENST00000477929 1024 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 RPS29P19-201ENST00000479709 171 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 MTAPP1-201ENST00000489154 819 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AC104685.1-201ENST00000502445 371 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AC108145.1-201ENST00000503770 153 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AC147055.4-201ENST00000504399 745 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.28□□□□□ -1.72
SMAD6O43541 AC010587.2-201ENST00000511727 448 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 RNU6-678P-201ENST00000516832 109 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.28□□□□□ -1.72
SMAD6O43541 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.28□□□□□ -1.72
SMAD6O43541 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.28□□□□□ -1.72
SMAD6O43541 AC106038.2-201ENST00000520706 568 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AC090281.1-201ENST00000523019 276 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AC016957.1-201ENST00000534895 309 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.28□□□□□ -1.72
SMAD6O43541 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.28□□□□□ -1.72
SMAD6O43541 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SMAD6O43541 AC007954.1-201ENST00000554198 494 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AL049870.4-201ENST00000555741 486 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.28□□□□□ -1.72
SMAD6O43541 AC007224.1-201ENST00000564410 144 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AC012414.6-201ENST00000568241 401 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.28□□□□□ -1.72
SMAD6O43541 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.28□□□□□ -1.72
SMAD6O43541 MTND1P15-201ENST00000579262 949 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.28□□□□□ -1.72
SMAD6O43541 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.28□□□□□ -1.72
SMAD6O43541 AC090186.1-201ENST00000605991 572 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AL031775.1-201ENST00000607014 887 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AL355816.1-201ENST00000607951 118 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AL451074.6-201ENST00000608512 729 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 AP000238.1-201ENST00000608759 426 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 AC023043.4-201ENST00000612081 449 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 AC009237.17-201ENST00000618111 748 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 MIR492-201ENST00000638676 116 ntBASIC4.28□□□□□ -1.72
SMAD6O43541 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SMAD6O43541 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.28□□□□□ -1.72
SMAD6O43541 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.28□□□□□ -1.72
SMAD6O43541 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SMAD6O43541 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.28□□□□□ -1.72
SMAD6O43541 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SMAD6O43541 NOL8P1-201ENST00000508336 3529 ntBASIC4.28□□□□□ -1.73
SMAD6O43541 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.28□□□□□ -1.73
SMAD6O43541 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMAD6O43541 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMAD6O43541 SAGE2P-201ENST00000420011 2126 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMAD6O43541 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.27□□□□□ -1.73
SMAD6O43541 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.27□□□□□ -1.73
SMAD6O43541 AC067945.1-201ENST00000342609 618 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 RNA5SP28-201ENST00000363841 119 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 RNU6-707P-201ENST00000364647 95 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.27□□□□□ -1.73
SMAD6O43541 RNY3P14-201ENST00000384309 102 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 TAF9BP1-201ENST00000396646 746 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 MTND4LP20-201ENST00000402379 270 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AL022722.2-201ENST00000402519 180 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 LAP3P1-201ENST00000403648 294 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 RN7SKP33-201ENST00000410942 340 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 AL161631.1-201ENST00000417933 486 ntBASIC4.27□□□□□ -1.73
SMAD6O43541 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.27□□□□□ -1.73
SMAD6O43541 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.27□□□□□ -1.73
SMAD6O43541 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms