Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC104978.1-201ENST00000449387 391 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 FABP3P2-201ENST00000453169 399 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 RPL23AP71-201ENST00000470966 469 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 VN1R105P-201ENST00000486595 910 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 RPS26P15-201ENST00000488067 348 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 DYNLL1P6-201ENST00000503440 264 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC025554.1-201ENST00000505641 188 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 MTATP6P22-201ENST00000507369 598 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC008494.2-201ENST00000514544 370 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 RNA5SP179-201ENST00000517284 121 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 IGKV2-38-201ENST00000517443 247 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 RFPL1S-203ENST00000539579 330 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC135279.1-201ENST00000543493 504 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC135001.1-201ENST00000544546 283 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC008015.1-201ENST00000555505 465 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 BNIP3P5-201ENST00000562290 498 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 PIGPP4-201ENST00000584447 307 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC110760.3-201ENST00000598794 467 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 NTAN1P1-201ENST00000603150 646 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC083899.3-201ENST00000603413 594 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AL358072.1-201ENST00000604156 575 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC069545.1-201ENST00000605671 358 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 MIR4278-201ENST00000636094 69 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AC068137.4-201ENST00000638485 296 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AP000776.1-201ENST00000530032 1663 ntBASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX9Q9Y5X1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
SNX9Q9Y5X1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC119744.1-201ENST00000454746 1715 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC046144.1-201ENST00000478559 1853 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 RNA5SP399-201ENST00000364003 117 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 RN7SKP280-201ENST00000364196 304 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 SNORD116-1-201ENST00000384335 95 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 SKINT1L-201ENST00000401057 817 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 ZNF603P-201ENST00000405613 487 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 MIR1251-201ENST00000408552 70 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 RNA5SP239-201ENST00000410218 129 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 RPL17P36-201ENST00000420302 549 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 USP9YP26-201ENST00000421008 661 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 MTND4P32-201ENST00000437189 1237 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 HMGB1P48-201ENST00000446155 598 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 ANKRD26P4-201ENST00000455755 950 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 RN7SL271P-201ENST00000487601 295 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC082651.2-201ENST00000496833 166 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC021146.8-201ENST00000507455 733 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 OR5M7P-201ENST00000526140 972 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AP000619.3-201ENST00000535634 1127 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC022968.1-201ENST00000567372 442 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC022916.3-201ENST00000592961 742 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC091167.4-201ENST00000605079 184 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AL592436.1-201ENST00000605135 558 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AL139418.1-201ENST00000613613 177 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC022509.4-201ENST00000621404 572 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 CDRT1-208ENST00000630868 794 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AF001550.2-201ENST00000636643 217 ntBASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms