Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 Y_RNA.455-201ENST00000384230 98 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 PRELID1P1-201ENST00000403549 660 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AL121835.1-201ENST00000404250 354 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 DPPA2P2-201ENST00000418220 897 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 E2F6P2-201ENST00000420708 748 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 RPL23AP69-201ENST00000431134 458 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 PA2G4P1-201ENST00000442248 1197 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 HMGB3P21-201ENST00000452483 547 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AC010350.1-201ENST00000504908 231 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AC009812.2-201ENST00000517657 457 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 DEFB108D-201ENST00000527787 222 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 SETP7-201ENST00000552169 453 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AC091078.2-201ENST00000557145 559 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 MIR3157-201ENST00000578688 85 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AC027229.1-201ENST00000583887 253 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AC020910.3-201ENST00000603701 874 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AL442128.2-201ENST00000620246 1824 ntBASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AL731532.1-201ENST00000623972 4236 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU6-490P-201ENST00000362985 107 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 RNA5-8SP7-201ENST00000363443 155 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 RNY1P14-201ENST00000384426 108 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 Y_RNA.574-201ENST00000384766 95 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 SNORA75.6-201ENST00000391318 127 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 RN7SKP151-201ENST00000410230 316 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 RN7SKP121-201ENST00000410842 305 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 HNRNPDLP1-201ENST00000412834 550 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 RPS15AP40-201ENST00000419621 391 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 RPS12P5-201ENST00000423449 371 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 OSTCP4-201ENST00000424397 449 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 NRBF2P3-201ENST00000432731 865 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 RPL21P112-201ENST00000434403 463 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AC245291.3-201ENST00000443400 292 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AC012123.2-201ENST00000485809 248 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 RN7SL283P-201ENST00000489055 303 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 HMGB1P30-201ENST00000492455 606 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AP002812.1-201ENST00000495378 474 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AC006499.3-201ENST00000506077 748 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AC016065.2-201ENST00000514530 444 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 SNORA74.1-201ENST00000516320 180 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU6-685P-201ENST00000517088 95 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 NRBF2P4-201ENST00000520874 850 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AL121576.1-201ENST00000556055 276 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AC110743.1-201ENST00000584870 478 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AL355812.1-201ENST00000603215 216 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AL670379.4-201ENST00000605279 254 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AC009570.1-201ENST00000609599 745 ntBASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6□□□□□ -1.45
PCDHGA11Q9Y5H2 AC108751.5-201ENST00000492880 1336 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC116667.1-201ENST00000604855 2072 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms