Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AL121657.1-201ENST00000327215 531 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 RNU6-619P-201ENST00000365146 108 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 MIR23A-201ENST00000385245 73 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 MIR16-1-201ENST00000385271 89 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AL049693.1-201ENST00000402760 611 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 ZNF603P-201ENST00000405613 487 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AL663109.1-201ENST00000411498 844 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC140479.3-201ENST00000418944 1126 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 RPL18P10-201ENST00000425606 538 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 RPL7P4-203ENST00000430239 730 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 TPTE2P6-202ENST00000445572 1007 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 MTCO2P25-201ENST00000447065 681 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AL513533.1-201ENST00000453728 415 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 RPL7P1-201ENST00000468161 747 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 RPL7P9-201ENST00000468715 747 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 SCARNA22-201ENST00000503991 125 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 RNU6-1225P-201ENST00000516336 65 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 RNU6-678P-201ENST00000516832 109 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 NRON-201ENST00000517270 370 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AP001317.1-201ENST00000531194 960 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AL110118.1-201ENST00000553543 400 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC008507.1-201ENST00000587506 734 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 VN1R84P-201ENST00000593697 235 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC239868.4-201ENST00000608318 671 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC010678.1-201ENST00000614118 713 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC116165.2-201ENST00000616705 206 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AL136981.2-201ENST00000617319 734 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC008443.7-201ENST00000622195 246 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 AC073348.1-201ENST00000623002 331 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 SAMMSON-226ENST00000642089 1582 ntBASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.05□□□□□ -1.76
PCDHGB1Q9Y5G3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 MFSD8-216ENST00000641147 4009 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 SNORA71.2-201ENST00000364941 134 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 AC068538.1-201ENST00000376856 336 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 SNORA75-201ENST00000384158 137 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 RNA5SP332-201ENST00000391063 115 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 TAF9BP1-201ENST00000396646 746 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 RN7SKP222-201ENST00000410651 315 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 RN7SKP27-201ENST00000410684 333 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 AC022028.1-201ENST00000412054 408 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 CDK8P2-201ENST00000415020 547 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 AC048351.1-201ENST00000420064 602 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 CYCSP46-201ENST00000423569 204 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 DPRXP1-201ENST00000426312 460 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 Z93242.1-201ENST00000427102 353 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 AC007559.1-201ENST00000428736 355 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 SEPT7P5-201ENST00000434048 306 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 AC241584.1-201ENST00000438469 1241 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 ZNF114P1-201ENST00000453500 292 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 RPL23AP71-201ENST00000470966 469 ntBASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
PCDHGB1Q9Y5G3 RPL36AP41-201ENST00000493820 306 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms