Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AC020914.6-201ENST00000594327 272 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AC025588.3-201ENST00000604182 274 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AL513477.2-201ENST00000607858 568 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 RMST_8.1-201ENST00000610287 165 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 PLCE1P1-201ENST00000622094 305 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AP006248.3-201ENST00000623580 594 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 MFSD8-236ENST00000641509 4050 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RNVU1-3-201ENST00000364313 161 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 MIR1193-201ENST00000408109 78 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RN7SKP285-201ENST00000410137 318 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RNA5SP129-201ENST00000410276 118 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RN7SKP159-201ENST00000410657 292 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RNU4-27P-201ENST00000410889 139 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RIOK3P1-201ENST00000418778 1528 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AC073508.1-201ENST00000428866 656 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RPS7P2-201ENST00000435134 607 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 NPM1P13-201ENST00000452663 865 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RPS24P6-201ENST00000452670 400 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 HMGB1P15-201ENST00000453854 435 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AC092754.2-201ENST00000463506 460 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RPL23AP14-201ENST00000468281 468 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RN7SL330P-201ENST00000469709 307 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RPL21P47-201ENST00000483696 477 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 MTCO3P35-201ENST00000485582 781 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AP000563.1-201ENST00000490865 758 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AL024509.2-201ENST00000493462 493 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AC020893.1-201ENST00000502452 580 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RN7SKP18-201ENST00000516005 275 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 RNU6-416P-201ENST00000516265 103 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 MED28P5-201ENST00000528254 438 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AC124293.1-201ENST00000530034 493 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 PDCL2P2-201ENST00000533651 189 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AC006116.10-201ENST00000591836 581 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AL354976.1-201ENST00000613843 387 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 AC006963.1-201ENST00000624003 1052 ntBASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC40Q9H9A6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 MTND5P31-201ENST00000419366 1374 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 MTND4P34-201ENST00000572715 1371 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AC091152.2-201ENST00000591628 2569 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 FRG1CP-201ENST00000358464 769 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 RNA5SP295-201ENST00000362655 121 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 RNU6-792P-201ENST00000363490 107 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 RNA5SP479-201ENST00000364858 117 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 RPL21P17-201ENST00000397467 475 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AL158050.1-201ENST00000416077 457 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AL357078.2-201ENST00000416486 427 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AL049610.1-201ENST00000423374 372 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 SETP5-201ENST00000437270 562 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 SNORA70.19-201ENST00000516717 90 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 SNORA31.20-201ENST00000517111 133 ntBASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.56□□□□□ -1.84
LRRC40Q9H9A6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms