Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AL845331.3-202ENST00000562856 261 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AC022884.3-201ENST00000579571 248 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 FAM60CP-201ENST00000591086 664 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AL451007.1-201ENST00000595491 289 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 OR2AS2P-201ENST00000606902 342 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AC099778.2-201ENST00000610904 211 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 uc_338.25-201ENST00000613756 156 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 MIR7112-201ENST00000616126 65 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 Z83843.1-201ENST00000604070 3685 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AC091152.2-201ENST00000591628 2569 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 SEPT7P7-201ENST00000420492 1301 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 ZNF542P-204ENST00000482727 1305 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 ANKRD36P1-201ENST00000344424 659 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 MIR148B-201ENST00000362252 99 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 RNU6-666P-201ENST00000363499 107 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 MIR124-3-201ENST00000384866 87 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 BTF3P9-201ENST00000418784 283 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 RPL27AP5-201ENST00000469428 449 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 RPL23AP44-201ENST00000482216 473 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 OR5H4P-201ENST00000510851 923 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 SNORD116-30-201ENST00000516468 85 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 AC068657.1-201ENST00000520807 306 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 NF1P5-201ENST00000588287 448 ntBASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.79□□□□□ -1.8
UPF3BQ9BZI7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 U3.11-201ENST00000364476 212 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 RPL31P45-201ENST00000419532 356 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 MTCO1P52-201ENST00000433928 531 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 RPL31P20-201ENST00000449593 360 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 RPS27P29-201ENST00000463110 252 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 AC092451.1-201ENST00000480211 153 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 PHBP14-201ENST00000512887 367 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 UBE2NP1-201ENST00000545592 458 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 AC008083.2-201ENST00000546707 476 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 AC125494.3-201ENST00000602759 455 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 RNA5SP108-201ENST00000605921 117 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 AL589935.2-201ENST00000616471 1231 ntBASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.78□□□□□ -1.8
UPF3BQ9BZI7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
UPF3BQ9BZI7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 AC116096.1-201ENST00000566804 2314 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 U3.6-201ENST00000363622 211 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 CCNB2P1-201ENST00000399411 1150 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 AL357075.1-201ENST00000404107 726 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 PRELID3BP11-201ENST00000414230 479 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 HMGB3P23-201ENST00000414981 585 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 AL392003.1-201ENST00000434394 243 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 AL671855.1-201ENST00000446875 1203 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 VN1R48P-201ENST00000448149 1036 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 RPL21P8-201ENST00000465083 535 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 RPL21P103-201ENST00000479921 488 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 AC118465.1-201ENST00000513820 1271 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 AC093331.1-201ENST00000521474 169 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 MIR5680-201ENST00000577577 84 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 AC073657.2-201ENST00000605661 303 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 AL591516.1-201ENST00000611326 274 ntBASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.77□□□□□ -1.81
UPF3BQ9BZI7 AC005183.1-201ENST00000603687 1979 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 DCAF13P1-201ENST00000495256 1330 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 B3GNT2P1-201ENST00000434960 952 ntBASIC3.76□□□□□ -1.81
UPF3BQ9BZI7 FTH1P1-201ENST00000437933 532 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms