Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RNU6-343P-201ENST00000364709 104 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC005077.1-201ENST00000449226 375 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC011225.1-201ENST00000457751 369 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 SNRPFP3-201ENST00000457792 225 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 RPL23AP41-201ENST00000484754 458 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC021146.3-201ENST00000511911 260 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC078899.1-201ENST00000521432 1185 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC040926.1-201ENST00000530195 238 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC128657.1-201ENST00000549459 145 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 LSM6P2-201ENST00000552208 177 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 CTSLP2-201ENST00000580501 394 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AL353997.4-201ENST00000586196 166 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AL022394.1-201ENST00000606979 292 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 OR6R2P-201ENST00000609216 300 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AL627230.1-201ENST00000613077 211 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.44
CNTNAP3Q9BZ76 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AC108751.5-201ENST00000492880 1336 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AL161781.1-201ENST00000354277 403 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 Y_RNA.19-201ENST00000362462 99 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 RNU1-134P-201ENST00000362935 165 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 EIF5P1-201ENST00000400019 1231 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AL023807.1-201ENST00000407932 359 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 RNU2-22P-201ENST00000411266 212 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 POLHP1-201ENST00000411806 470 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AC011933.1-201ENST00000413334 321 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 USMG5P1-201ENST00000425964 177 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AL139148.1-201ENST00000427122 680 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 RPL37P1-201ENST00000432310 284 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 PPIAP13-201ENST00000434706 478 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 FCF1P4-201ENST00000448326 183 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AL445466.1-201ENST00000448432 357 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 RNU7-120P-201ENST00000459334 63 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AC004801.2-202ENST00000463559 283 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 SCARNA5-201ENST00000516201 276 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 RNU4-71P-201ENST00000516258 113 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 SNORA40.14-201ENST00000516543 86 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 RNA5SP384-201ENST00000516615 116 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 RN7SL208P-201ENST00000577964 296 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 MIR1254-2-201ENST00000579553 63 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AC092747.3-201ENST00000603769 301 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 ATP5A1P2-202ENST00000616464 443 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNTNAP3Q9BZ76 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms