Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 Y_RNA.717-201ENST00000517106 92 ntBASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 AC004024.1-201ENST00000549244 247 ntBASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 ZNF192P1-203ENST00000565888 810 ntBASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 BPTFP1-201ENST00000579209 492 ntBASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 AC234771.5-201ENST00000600161 514 ntBASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 AC140725.3-201ENST00000616193 880 ntBASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 AC109809.1-201ENST00000619665 545 ntBASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 AC097520.1-201ENST00000624435 385 ntBASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 AP003072.4-201ENST00000624580 310 ntBASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 AC138915.3-201ENST00000562908 1389 ntBASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 AL353743.4-201ENST00000422653 1547 ntBASIC3.6□□□□□ -1.83
CCDC28BQ9BUN5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AF127577.6-201ENST00000623352 2191 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 RNU4-92P-201ENST00000363783 136 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 RNA5SP235-201ENST00000365411 114 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 Y_RNA.472-201ENST00000384322 102 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 RPS4XP9-201ENST00000405151 780 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 OR51A3P-201ENST00000413596 924 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 PRELID3BP11-201ENST00000414230 479 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC007394.1-201ENST00000421941 531 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 BX890604.2-201ENST00000427883 474 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 EEF1A1P39-201ENST00000440791 250 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 NDUFA12P1-201ENST00000455914 406 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 NAP1L1P3-201ENST00000462291 880 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 PRDX3P4-201ENST00000470828 747 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC015724.1-201ENST00000478577 156 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 MTCO3P35-201ENST00000485582 781 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC110792.1-201ENST00000491826 472 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 FCF1P3-201ENST00000496394 590 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC020893.1-201ENST00000502452 580 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC113347.3-201ENST00000509113 148 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC008494.2-201ENST00000514544 370 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 RN7SKP287-201ENST00000516546 266 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 MIR3138-201ENST00000585238 82 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC093424.1-201ENST00000604999 338 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC024940.4-201ENST00000605507 246 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AP000238.1-201ENST00000608759 426 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AL592148.2-201ENST00000612210 372 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AL356863.1-201ENST00000623378 1080 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC087821.2-201ENST00000637086 450 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 LINC02211-204ENST00000642024 1070 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 AC073073.2-201ENST00000609827 2578 ntBASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC28BQ9BUN5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC28BQ9BUN5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC28BQ9BUN5 AC091152.2-201ENST00000591628 2569 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 SRP72P2-201ENST00000344851 1979 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 RNU4-28P-201ENST00000364739 141 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 RNU6-619P-201ENST00000365146 108 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 OR1L1-202ENST00000373686 1083 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 RAC1P8-201ENST00000427086 527 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms