Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MTND5P1-201ENST00000445440 1375 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 RNA5SP383-201ENST00000362934 120 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 OR51AB1P-201ENST00000429046 620 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 RPL23AP22-201ENST00000437556 453 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 XKRY2-201ENST00000442362 1093 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 RPS15AP29-201ENST00000445539 400 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AC104689.1-201ENST00000473356 768 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AL358832.1-201ENST00000497800 389 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 RNU1-143P-201ENST00000516296 146 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 OR6C73P-201ENST00000546432 358 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AC010928.3-201ENST00000587712 541 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 U1.23-201ENST00000610293 146 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AL450489.1-201ENST00000612071 468 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AL359535.1-201ENST00000612100 1087 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 RNU1-68P-201ENST00000615382 146 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AC022079.2-201ENST00000619739 566 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 U1.39-201ENST00000621562 146 ntBASIC3.42□□□□□ -1.86
C9orf72Q96LT7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 RAD1P1-201ENST00000231383 813 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 OR52E6-202ENST00000379946 954 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AL590623.1-201ENST00000427864 105 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 RPL23AP83-201ENST00000434984 473 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AC114878.1-201ENST00000441166 358 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AC092685.1-201ENST00000447960 1243 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AC114967.1-201ENST00000504890 259 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AC112198.1-201ENST00000505369 1220 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AC005476.1-201ENST00000554427 397 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 MIR5186-201ENST00000577504 120 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AL161756.2-201ENST00000604597 246 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AC099778.2-201ENST00000610904 211 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 U6.107-201ENST00000637108 79 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AL157700.1-201ENST00000561973 1432 ntBASIC3.41□□□□□ -1.86
C9orf72Q96LT7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
C9orf72Q96LT7 AC073346.2-201ENST00000624724 2058 ntBASIC3.4□□□□□ -1.86
C9orf72Q96LT7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
C9orf72Q96LT7 RNU1-33P-201ENST00000364249 162 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 RNA5SP267-201ENST00000364893 126 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 AC083799.1-201ENST00000366451 910 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 AC006960.1-201ENST00000419980 153 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 SETP5-201ENST00000437270 562 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 NPM1P49-201ENST00000448027 714 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 AC104978.1-201ENST00000449387 391 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 RPS27P29-201ENST00000463110 252 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 AC025518.1-201ENST00000479856 347 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 TXNP6-201ENST00000510190 310 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 OR4R3P-201ENST00000525084 838 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 OR5AK3P-201ENST00000527486 1297 ntBASIC3.4□□□□□ -1.87
C9orf72Q96LT7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.4□□□□□ -1.87
C9orf72Q96LT7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms