Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC016769.2-201ENST00000414815 475 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 MTCO3P1-205ENST00000422088 832 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 RPEP3-201ENST00000425462 676 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC114495.1-201ENST00000441274 436 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 USP9YP29-201ENST00000445112 563 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 CDC27P1-201ENST00000445384 715 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 NDUFA5P7-201ENST00000452914 242 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 SNRPGP9-201ENST00000456025 225 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 CFTRP1-201ENST00000456646 183 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 RPL35AP15-201ENST00000468042 339 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 RPL21P126-201ENST00000470049 478 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 PRELID3BP7-201ENST00000503606 469 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC006499.5-201ENST00000505037 514 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 HMGB1P28-201ENST00000507778 552 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 SNORA48.10-201ENST00000516965 160 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC084783.1-201ENST00000565846 910 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC008782.1-201ENST00000603386 430 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AL139286.1-201ENST00000604465 483 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC087752.4-201ENST00000605911 462 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AL161616.1-201ENST00000611867 286 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC100793.4-201ENST00000613683 429 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC015540.1-201ENST00000615828 501 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC015908.5-201ENST00000623289 343 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AP001784.1-201ENST00000624107 428 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AL359740.1-201ENST00000624340 592 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC006927.3-201ENST00000638789 384 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC008725.1-201ENST00000605123 2263 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 PHKBP1-201ENST00000450951 1951 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 DHX40P1-201ENST00000588725 1412 ntBASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.03□□□□□ -1.76
CLIP4Q8N3C7 AC027514.1-201ENST00000588561 1603 ntBASIC4.03□□□□□ -1.77
CLIP4Q8N3C7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 RAD17P1-201ENST00000418130 2042 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 OR5BR1P-201ENST00000524992 1330 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC105074.1-201ENST00000623380 3095 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC009229.4-201ENST00000623854 1947 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC008033.1-201ENST00000216407 1162 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 OR4K15-201ENST00000305051 1216 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 RN7SKP103-201ENST00000363848 320 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 RNU6-115P-201ENST00000364310 107 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC019155.1-201ENST00000382242 574 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AL078595.1-201ENST00000404458 226 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AL512430.2-201ENST00000406786 339 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 RNU2-16P-201ENST00000410712 136 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 CDK8P2-201ENST00000415020 547 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AL353597.2-202ENST00000434901 373 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 RPS26P40-201ENST00000435209 294 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 ARL2BPP10-201ENST00000446487 531 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 EEF1A1P1-201ENST00000447052 739 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC073264.2-201ENST00000448886 166 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 ABCF2P2-201ENST00000450549 296 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AL162388.1-201ENST00000450912 352 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 RPL5P32-201ENST00000454085 879 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 DHFRP3-201ENST00000455595 559 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 NF1P3-201ENST00000457709 450 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 ARPC3P2-201ENST00000457786 533 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 RPL7P22-201ENST00000466005 733 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 OR52A4P-201ENST00000472867 958 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 RPS4XP15-201ENST00000489210 795 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 RNU6-720P-201ENST00000516363 108 ntBASIC4.02□□□□□ -1.77
CLIP4Q8N3C7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms