Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL163153.1-201ENST00000554223 283 ntBASIC3.72□□□□□ -1.81
CCDC65Q8IXS2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC65Q8IXS2 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC65Q8IXS2 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC65Q8IXS2 KATNBL1P5-201ENST00000605015 517 ntBASIC3.72□□□□□ -1.81
CCDC65Q8IXS2 AC006133.1-201ENST00000617106 264 ntBASIC3.72□□□□□ -1.81
CCDC65Q8IXS2 AC022079.2-201ENST00000619739 566 ntBASIC3.72□□□□□ -1.81
CCDC65Q8IXS2 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC65Q8IXS2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC65Q8IXS2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC65Q8IXS2 AC083865.1-201ENST00000636634 831 ntBASIC3.72□□□□□ -1.81
CCDC65Q8IXS2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 RNU6-356P-201ENST00000384140 107 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 RNU6-796P-201ENST00000391086 107 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 RPL23AP47-201ENST00000408017 460 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 MIR1303-201ENST00000408625 86 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AC093578.1-201ENST00000415219 368 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AC245052.5-201ENST00000416320 649 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AC012065.2-201ENST00000421295 375 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 PNRC2P1-201ENST00000423940 420 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 BX679664.1-201ENST00000434429 253 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 SNORA84-201ENST00000459229 133 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AC104687.1-201ENST00000485829 412 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 RN7SKP157-201ENST00000516174 282 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 SNORA67.7-201ENST00000516664 135 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AP000919.1-202ENST00000581139 1264 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 OR2BH1P-201ENST00000608850 864 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AL355365.1-201ENST00000616480 294 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 SNORD39.4-201ENST00000620099 78 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AC022031.1-201ENST00000585985 2593 ntBASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC65Q8IXS2 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AL049737.1-201ENST00000413920 1403 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 RNU1-75P-201ENST00000347264 129 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 MIR607-201ENST00000385241 96 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 HMGB3P31-201ENST00000413333 595 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC234782.4-201ENST00000417646 1048 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 HMGN2P20-201ENST00000437531 273 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 RPS27P5-201ENST00000444247 244 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 RPL7P5-201ENST00000471472 736 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 RPS27AP1-201ENST00000475545 471 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC012181.1-201ENST00000479895 423 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 RPS4XP22-201ENST00000480755 780 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 RPS4XP13-201ENST00000483219 789 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC093663.1-201ENST00000497190 394 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC111193.1-201ENST00000504097 155 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 RNU6-1102P-201ENST00000516149 96 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC007458.1-201ENST00000542812 373 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC005476.1-201ENST00000554427 397 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC113194.1-201ENST00000606037 500 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC245389.2-201ENST00000616023 576 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC243756.2-201ENST00000618406 463 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AC242843.1-201ENST00000618702 573 ntBASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC65Q8IXS2 AL049781.1-201ENST00000623195 3585 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 HSFY4P-201ENST00000415994 1181 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 GLRXP1-201ENST00000423261 334 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms