Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC011458.1-201ENST00000604034 617 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC112220.2-201ENST00000605513 533 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AL732618.1-201ENST00000623251 301 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC112200.1-201ENST00000625015 234 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC010608.3-201ENST00000625048 527 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AL133412.1-201ENST00000380194 2992 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC091286.1-201ENST00000431233 461 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 RPL7P59-201ENST00000447700 943 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 NPM1P13-201ENST00000452663 865 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AP002812.1-201ENST00000495378 474 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC093752.1-206ENST00000511823 336 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 SNORA70.18-201ENST00000516696 98 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC091163.3-201ENST00000518269 1144 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 MTCO3P15-201ENST00000526563 574 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC044913.1-201ENST00000557200 430 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC020914.6-201ENST00000594327 272 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AL583856.2-201ENST00000606298 543 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AP005137.2-201ENST00000609238 400 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC109454.4-201ENST00000623411 649 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AP003485.1-201ENST00000625093 753 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC006504.1-201ENST00000562493 3666 ntBASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf40Q8IXQ3 AC007656.2-201ENST00000624902 4547 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 RNA5SP239-201ENST00000410218 129 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 C1DP1-201ENST00000426049 402 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 MTCYBP32-201ENST00000427945 1084 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC008065.1-201ENST00000428525 348 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 RPL36P19-201ENST00000430744 301 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 MTCYBP42-201ENST00000444653 1130 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AL136097.1-201ENST00000456945 913 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC091564.1-201ENST00000464563 479 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC106707.2-201ENST00000484182 374 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC005726.1-201ENST00000494679 427 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC011352.3-201ENST00000505162 593 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC021146.1-201ENST00000511202 716 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC109471.1-201ENST00000511631 612 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC023632.1-201ENST00000518463 375 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC008489.1-201ENST00000524271 483 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 MTND2P26-201ENST00000528255 1029 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 MIR4666A-201ENST00000580160 79 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC022069.1-201ENST00000582910 658 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC091057.3-201ENST00000602684 733 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC105227.2-201ENST00000615075 605 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC104985.3-201ENST00000623479 597 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 AC009093.8-201ENST00000641769 292 ntBASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
C9orf40Q8IXQ3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
C9orf40Q8IXQ3 AC090337.1-201ENST00000579651 2074 ntBASIC3.34□□□□□ -1.88
C9orf40Q8IXQ3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
C9orf40Q8IXQ3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms