Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
HERC6Q8IVU3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 OR5BR1P-201ENST00000524992 1330 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 RNA5SP124-201ENST00000362739 110 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 RNU6-356P-201ENST00000384140 107 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 MIR7-3-201ENST00000384898 110 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 MIR153-1-201ENST00000384914 90 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 RNU6-757P-201ENST00000410334 100 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC093578.1-201ENST00000415219 368 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 EIF1P3-201ENST00000423841 334 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 MTCO2P20-201ENST00000437339 673 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 RNA5SP246-201ENST00000458909 119 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 RPL37P6-202ENST00000464216 403 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 RPL7P49-201ENST00000471402 708 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 RPL7P38-201ENST00000488396 739 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 MTCYBP35-201ENST00000503630 1137 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC113430.1-201ENST00000506872 718 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC105185.1-201ENST00000518705 535 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AP001636.2-201ENST00000525517 696 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 ZNF321P-202ENST00000550843 495 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC009094.1-201ENST00000564443 426 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AL357094.1-201ENST00000603845 844 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 SNORA51-201ENST00000606420 132 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC078899.5-201ENST00000612475 178 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 MIR6500-201ENST00000622700 86 ntBASIC4.58□□□□□ -1.68
HERC6Q8IVU3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HERC6Q8IVU3 AC016588.2-201ENST00000632484 3021 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 RNVU1-3-201ENST00000364313 161 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 Y_RNA.408-201ENST00000383987 102 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 SNORA51.6-201ENST00000384151 125 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 SNRPEP2-201ENST00000397592 279 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 MTND4P13-201ENST00000402078 1023 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 RPS6P15-201ENST00000431996 751 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 RPL29P29-201ENST00000448725 423 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AC146507.1-201ENST00000468335 354 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 RPL23AP65-201ENST00000475608 468 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AC108022.1-201ENST00000493466 478 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 DSTNP2-201ENST00000504533 515 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 MTCYBP37-201ENST00000510642 1133 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 RNA5SP446-201ENST00000515955 82 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 RNU6-583P-201ENST00000516012 92 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 MTATP6P15-201ENST00000527233 835 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AP000926.4-201ENST00000527351 454 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AC145350.1-201ENST00000567426 208 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AL355812.1-201ENST00000603215 216 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AC245297.2-201ENST00000610119 565 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AC008083.4-201ENST00000615076 444 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 MIR6715B-201ENST00000637172 77 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AC074029.4-201ENST00000624796 1859 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AC130650.2-201ENST00000618736 2403 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 AL079343.1-201ENST00000572358 1771 ntBASIC4.57□□□□□ -1.68
HERC6Q8IVU3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HERC6Q8IVU3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HERC6Q8IVU3 GDI2P1-201ENST00000429312 1336 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms