Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 Z99755.1-201ENST00000414048 380 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AL356968.1-201ENST00000416622 474 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 RPL36P19-201ENST00000430744 301 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 FABP5P3-201ENST00000437960 408 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 RAB11AP1-201ENST00000442978 646 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 NOTCH2P1-201ENST00000443481 624 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 MTND1P33-201ENST00000446251 917 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 SNORD105B-201ENST00000458770 79 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 ACTR3P3-201ENST00000480448 893 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AC008885.2-201ENST00000509506 930 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AC104619.4-201ENST00000510773 249 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AC016065.2-201ENST00000514530 444 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 RN7SKP96-201ENST00000516948 297 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 VN1R9P-201ENST00000614184 867 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AL121772.2-201ENST00000614331 297 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AC121761.2-201ENST00000617300 689 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AC006213.5-201ENST00000619673 288 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AC008432.1-201ENST00000615912 1320 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 MFSD8-233ENST00000641482 4860 ntBASIC3.59□□□□□ -1.84
CCDC50Q8IVM0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CCDC50Q8IVM0 XPOTP1-201ENST00000443317 2398 ntBASIC3.59□□□□□ -1.84
CCDC50Q8IVM0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 MIR16-2-201ENST00000362117 81 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 RNA5SP124-201ENST00000362739 110 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 RPL21P17-201ENST00000397467 475 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 ATP5F1P6-201ENST00000402768 767 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 RPL23AP69-201ENST00000431134 458 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 OR2B8P-201ENST00000432841 938 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC008264.1-201ENST00000447612 367 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC233982.1-201ENST00000451247 436 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC007967.1-201ENST00000455422 1159 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 POU5F1P7-201ENST00000508759 541 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 RNA5SP385-201ENST00000515947 110 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 MIR2276-201ENST00000516886 89 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AF279873.1-201ENST00000523393 313 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 EIF5A2P1-201ENST00000564027 460 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 ZNF192P1-203ENST00000565888 810 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC091488.1-201ENST00000604239 660 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC021851.1-201ENST00000608537 1082 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC073592.7-201ENST00000623659 507 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 AC092608.3-201ENST00000625017 386 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 FAM157B-203ENST00000639350 358 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 ZNF285B-201ENST00000561698 1767 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 ZNF33CP-201ENST00000432492 2030 ntBASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC50Q8IVM0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 SNORA51.4-201ENST00000364993 124 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 SNORA57.1-201ENST00000391227 145 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 HSPE1P26-201ENST00000405341 275 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AC093422.3-201ENST00000428506 305 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 OR51AB1P-201ENST00000429046 620 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 ISCA1P2-201ENST00000438679 421 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 PPIAP3-201ENST00000450588 505 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms