Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC144530.1-201ENST00000452862 555 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AL354710.1-201ENST00000453641 246 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC104308.1-201ENST00000454621 333 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 RPS4XP10-201ENST00000465034 731 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC007998.1-201ENST00000474156 672 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC116562.3-201ENST00000506136 177 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 RNU2-10P-201ENST00000516375 211 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 RNU6-1046P-201ENST00000516538 107 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 Y_RNA.720-201ENST00000517166 92 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 RNU6-988P-201ENST00000519081 107 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC068587.5-201ENST00000528506 175 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 MIR4775-201ENST00000581168 75 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC100830.2-201ENST00000581636 240 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC019193.3-201ENST00000609144 554 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC245517.5-201ENST00000611529 162 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC114774.1-201ENST00000507410 1770 ntBASIC5.34□□□□□ -1.56
UBE3DQ7Z6J8 AL591135.1-201ENST00000401578 5914 ntBASIC5.34□□□□□ -1.56
UBE3DQ7Z6J8 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.34□□□□□ -1.56
UBE3DQ7Z6J8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
UBE3DQ7Z6J8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
UBE3DQ7Z6J8 THAP12P4-201ENST00000528321 2266 ntBASIC5.34□□□□□ -1.56
UBE3DQ7Z6J8 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC121333.1-201ENST00000567488 2709 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC066616.2-201ENST00000559334 1481 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC083899.1-201ENST00000454465 3819 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 PROS2P-201ENST00000474651 1951 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 RN7SKP15-201ENST00000364742 309 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 Y_RNA.373-201ENST00000365600 103 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 RNU6-39P-201ENST00000384344 107 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 RNA5SP284-201ENST00000384547 118 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 RN7SKP158-201ENST00000410453 326 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC074085.1-201ENST00000413598 418 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC005517.2-201ENST00000424673 553 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC009965.2-201ENST00000425328 970 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AL031736.2-201ENST00000426573 787 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 TMEM183AP1-205ENST00000432739 290 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 RNU7-66P-201ENST00000459469 62 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC006511.1-201ENST00000470614 315 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 TRBVA-201ENST00000498804 316 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 RNU7-51P-201ENST00000516560 62 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 NARSP2-201ENST00000518524 679 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC122688.1-201ENST00000541494 223 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC004817.2-201ENST00000561794 651 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 MIR4504-201ENST00000577413 92 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 PSMA6P4-201ENST00000603247 718 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AL121992.2-201ENST00000606262 256 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC015982.1-201ENST00000608113 465 ntBASIC5.33□□□□□ -1.56
UBE3DQ7Z6J8 AC103710.2-201ENST00000609912 942 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms