Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RAD23BP3-201ENST00000454157 1152 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AL024509.2-201ENST00000493462 493 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC108475.1-201ENST00000507880 950 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC099522.1-202ENST00000514718 367 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AP003730.1-201ENST00000524605 285 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 MED28P5-201ENST00000528254 438 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC022662.1-201ENST00000580252 331 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 MIR3939-201ENST00000582614 106 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 KPNA2P3-201ENST00000584190 848 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 SNORD39.3-201ENST00000584451 71 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC068790.5-201ENST00000602741 355 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 GAS5-AS1-201ENST00000602767 694 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC063944.3-201ENST00000609969 533 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 MIR6716-201ENST00000613413 80 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AL445567.2-201ENST00000618935 498 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC013470.4-201ENST00000619978 986 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 MIR6758-201ENST00000620653 63 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC073348.1-201ENST00000623002 331 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AL445363.3-201ENST00000623080 671 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC008013.2-202ENST00000637965 364 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AL031985.3-201ENST00000565390 2449 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AP001486.2-201ENST00000561652 5113 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 RPL32P3-201ENST00000359025 275 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 RNU6-328P-201ENST00000390887 106 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AL583834.1-201ENST00000406943 343 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 RPL23AP47-201ENST00000408017 460 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AL161449.1-201ENST00000414531 1199 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 ELOCP9-201ENST00000418624 239 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AIMP1P1-201ENST00000418670 937 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 HMGB1P49-201ENST00000418882 569 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 RPL23AP38-201ENST00000423801 469 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 NANOGP6-201ENST00000429190 847 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 RPL31P54-201ENST00000429803 370 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 MRPS18BP2-201ENST00000434310 759 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 RPL7P28-201ENST00000437739 740 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AL662791.1-201ENST00000441992 928 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 MTCO2P25-201ENST00000447065 681 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 PTENP1-201ENST00000447117 1215 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC104073.1-201ENST00000451988 151 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 RN7SL585P-201ENST00000470538 280 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC022034.3-201ENST00000471393 478 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 RPS29P19-201ENST00000479709 171 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC093267.1-201ENST00000489176 961 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC017037.1-201ENST00000508460 471 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 MTCO3P44-201ENST00000510977 541 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 RN7SKP122-201ENST00000515923 296 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 RNU6-1261P-201ENST00000517194 104 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 IFITM8P-201ENST00000522529 394 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AP000619.3-201ENST00000535634 1127 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC005832.3-201ENST00000537929 631 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 SULT1C2P1-202ENST00000562418 459 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC009101.1-201ENST00000568135 242 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC069366.1-201ENST00000583159 838 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC234772.3-201ENST00000602277 528 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AL161729.3-201ENST00000603533 673 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 ARF4P1-201ENST00000605447 541 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC005332.6-201ENST00000613178 446 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC107075.1-201ENST00000613695 314 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 AC073968.1-201ENST00000618594 637 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 MIR8059-201ENST00000620427 81 ntBASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP54Q7Z3B4 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms