Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 RNU6-1261P-201ENST00000517194 104 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 IGLVIV-65-201ENST00000517313 360 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 IGLV3-26-201ENST00000520756 302 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 CBX3P5-201ENST00000552017 521 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AC024909.2-201ENST00000553035 286 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 BPIFA4P-203ENST00000603168 689 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AL133338.2-201ENST00000604292 736 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 uc_338.32-201ENST00000615087 172 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 MLECP1-201ENST00000615893 709 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AC073348.1-201ENST00000623002 331 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 LINC00622-201ENST00000562811 1570 ntBASIC5.08□□□□□ -1.6
LONRF3Q496Y0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LONRF3Q496Y0 AC130650.2-201ENST00000618736 2403 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 RNU6-623P-201ENST00000363143 105 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 RNU6-621P-201ENST00000364752 109 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 RNA5SP189-201ENST00000364920 115 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 Y_RNA.311-201ENST00000365068 96 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 MIR129-1-201ENST00000384972 72 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AL050321.1-201ENST00000432363 400 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC010153.1-201ENST00000432862 727 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC129850.1-201ENST00000436203 508 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC012158.1-204ENST00000483430 465 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 RN7SKP31-201ENST00000516354 278 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC100770.1-201ENST00000532310 322 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC068831.4-201ENST00000556118 109 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 TRAV15-201ENST00000556680 249 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 ACTR3BP3-201ENST00000565577 979 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC010928.3-201ENST00000587712 541 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AL031985.2-201ENST00000600955 480 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AP001981.2-201ENST00000603241 418 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 HMGN2P28-201ENST00000606102 262 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 AC073114.1-201ENST00000612027 490 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 CR381670.1-201ENST00000624291 1693 ntBASIC5.07□□□□□ -1.6
LONRF3Q496Y0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
LONRF3Q496Y0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 RAD17P1-201ENST00000418130 2042 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 SNRPEP2-201ENST00000397592 279 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AL049693.1-201ENST00000402760 611 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AL031577.2-201ENST00000404133 280 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms